Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold621
Parameters: 2 7 7 80 10 50 1000
Length:  42711

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
875--906
11
2.6
13
80
19
50
68
0
0
31
0.90
883--912
11
2.8
11
95
5
53
70
0
0
30
0.88
2508--2545
16
2.4
16
90
0
58
60
2
13
23
1.45
5226--5277
16
3.1
15
78
15
50
44
0
0
55
0.99
5362--5404
16
2.7
16
81
0
50
58
0
0
41
0.98
5632--5664
15
2.2
16
89
10
52
54
6
0
39
1.25
8024--8056
12
2.6
13
85
9
50
45
0
0
54
0.99
8892--8958
2
33.5
2
100
0
134
49
0
0
50
1.00
10535--10590
21
2.7
21
97
0
103
39
12
14
33
1.83
10616--10694
20
3.8
20
77
12
79
32
13
11
41
1.81
17620--17653
13
2.6
13
86
13
52
85
5
5
2
0.83
18963--20037
32
33.6
32
77
8
863
31
32
16
19
1.94
18963--20043
63
16.9
63
76
9
801
31
32
16
19
1.94
18975--20025
288
3.7
282
81
7
1088
31
32
16
19
1.94
20131--20308
52
3.4
52
76
6
164
26
20
14
38
1.91
20131--20361
104
2.2
105
80
4
236
25
21
14
38
1.91
20226--20367
52
2.7
53
81
4
164
26
21
13
38
1.90
20293--20425
52
2.6
52
83
0
149
24
24
14
36
1.93
20631--20788
52
3.1
51
77
5
174
24
24
15
35
1.94
21447--21495
20
2.4
21
83
10
57
42
6
16
34
1.73
21541--21618
20
3.8
20
77
12
77
35
17
8
37
1.82
29023--29054
2
16.0
2
100
0
64
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29294--29338
2
22.5
2
100
0
90
48
0
0
51
1.00
35820--35844
13
1.9
13
100
0
50
36
16
16
32
1.90
36172--36196
13
1.9
13
100
0
50
36
16
16
32
1.90
36152--36217
32
2.0
33
94
2
116
34
12
16
36
1.86
36237--36316
34
2.4
34
97
0
151
35
16
12
36
1.86
36236--36316
13
7.1
12
70
28
61
35
16
12
35
1.86
36325--36453
52
2.5
52
97
0
240
36
17
17
28
1.93

Tables:   1

The End!