Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold626
Parameters: 2 7 7 80 10 50 1000
Length:  37015

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
757--783
13
2.1
13
100
0
54
44
7
25
22
1.79
4603--4639
19
1.9
19
88
0
56
27
0
0
72
0.84
7346--7699
177
2.0
177
94
1
620
29
15
20
34
1.94
10462--10507
23
2.0
23
91
0
74
36
19
15
28
1.92
11958--11998
5
8.2
5
100
0
82
80
0
0
19
0.71
12549--12599
2
26.0
2
92
4
86
49
0
1
49
1.12
14454--14502
2
24.5
2
100
0
98
51
48
0
0
1.00
15225--15252
13
2.2
13
100
0
56
57
0
0
42
0.99
15306--15367
22
2.5
24
82
15
74
37
3
0
59
1.13
15295--15335
17
2.4
17
83
0
55
31
0
0
68
0.90
15587--15632
18
2.5
19
82
7
58
36
2
6
54
1.39
16026--16065
21
1.9
21
89
0
62
32
0
2
65
1.06
24809--24858
10
4.9
10
78
11
57
56
10
0
34
1.33
24813--24851
21
1.9
20
94
5
69
56
7
0
35
1.28
25482--25510
2
14.5
2
100
0
58
51
0
0
48
1.00
26414--26479
25
2.8
23
80
8
69
51
0
0
48
1.00
27425--27478
23
2.4
22
82
17
67
53
0
5
40
1.24
30674--30717
22
2.1
22
87
8
65
52
0
0
47
1.00
30687--30763
18
4.4
17
76
18
70
51
0
2
45
1.14
30704--30774
31
2.2
32
82
2
81
49
0
2
47
1.16
30753--30822
24
2.9
25
72
18
67
45
1
0
52
1.09
30734--30807
19
4.0
18
75
10
51
44
0
0
55
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31300--31339
16
2.4
16
83
4
53
37
0
2
60
1.11
34788--34836
17
2.9
16
82
11
53
36
0
2
61
1.08
35448--35518
36
2.0
36
88
0
106
35
1
4
59
1.26
35545--35643
49
2.1
49
83
11
125
52
0
0
47
1.00
36064--36103
19
2.1
19
86
9
55
65
0
2
32
1.06

Tables:   1

The End!