Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold627
Parameters: 2 7 7 80 10 50 1000
Length:  33720

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
248--272
13
1.9
13
100
0
50
36
16
16
32
1.90
228--293
32
2.0
33
88
2
98
33
12
13
40
1.82
365--539
52
3.5
51
93
3
293
33
18
17
29
1.95
4620--4644
10
2.5
10
100
0
50
0
0
20
80
0.72
14333--14442
1
110.0
1
77
0
85
86
8
3
1
0.76
14333--14442
36
2.9
37
81
6
134
86
8
3
1
0.76
14333--14444
47
2.4
45
84
12
131
84
8
5
1
0.82
15883--15963
30
2.7
30
90
3
128
28
23
20
27
1.99
15943--16037
27
3.3
27
78
17
93
32
34
16
15
1.91
15910--16037
57
2.2
60
84
4
163
29
32
17
20
1.96
15883--16009
30
4.3
30
81
9
127
30
28
17
23
1.97
15949--16037
30
3.0
30
74
19
96
31
34
16
16
1.92
16030--16281
49
5.0
49
82
7
281
26
25
15
33
1.95
16025--16278
107
2.5
99
84
7
296
25
25
15
33
1.95
17058--17124
33
2.0
33
88
0
98
34
11
13
40
1.81
17078--17102
13
1.9
13
100
0
50
36
16
16
32
1.90
17165--17189
13
1.9
13
100
0
50
32
16
16
36
1.90
17198--17372
51
3.4
51
96
1
314
35
18
17
28
1.94
21508--21534
10
2.7
10
100
0
54
0
0
22
77
0.76
31223--31336
1
114.0
1
78
0
93
86
7
3
1
0.74
31225--31336
41
2.9
37
81
9
125
86
8
3
1
0.75
31221--31336
49
2.4
49
84
11
152
85
9
3
1
0.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31223--31336
37
3.1
39
79
8
123
86
7
3
1
0.74
31233--31336
39
2.7
37
81
11
120
86
7
3
1
0.76
32780--32859
29
2.7
30
88
5
119
28
22
21
27
1.99
32807--32933
56
2.2
59
83
5
152
29
31
18
20
1.96
32780--32905
30
4.3
30
79
11
118
30
27
17
23
1.97
32845--32933
30
3.0
30
74
19
96
31
34
16
16
1.92
32926--33176
49
5.0
49
81
8
272
26
25
15
33
1.95

Tables:   1

The End!