Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold630
Parameters: 2 7 7 80 10 50 1000
Length:  21145

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5304--5335
13
2.5
13
94
0
55
87
3
6
3
0.73
6512--6597
27
3.1
27
62
15
68
24
25
22
27
1.99
6369--7042
171
4.0
171
88
4
947
26
27
20
24
1.99
6331--7043
226
3.1
224
83
9
870
26
27
20
25
1.99
6909--6996
26
3.3
26
65
14
70
26
30
19
23
1.98
6369--7042
55
11.9
55
83
8
732
26
27
20
24
1.99
7840--7894
21
2.7
21
80
5
69
34
12
14
38
1.84
7946--7971
13
2.0
13
100
0
52
30
15
15
38
1.88
7926--7992
34
2.0
33
91
2
107
26
16
11
44
1.82
8010--8058
20
2.5
20
100
0
98
34
14
12
38
1.83
12907--13526
55
10.9
54
83
9
659
26
27
20
25
1.99
13051--13136
27
3.1
27
62
15
68
24
25
22
27
1.99
12907--13526
172
3.6
165
86
7
755
26
27
20
25
1.99
13394--13480
27
3.3
26
64
17
70
26
32
19
21
1.97
14321--14374
21
2.7
21
75
8
60
33
11
14
40
1.82
14422--14447
13
2.0
13
100
0
52
30
15
15
38
1.88
14402--14468
34
2.0
33
91
2
107
25
16
13
44
1.84
14487--14534
19
2.5
20
96
3
89
35
14
12
37
1.84
16891--16942
27
1.9
27
100
0
104
25
34
19
21
1.96
16919--17089
79
2.2
78
88
6
247
25
26
16
32
1.96
17076--17249
52
3.4
50
80
4
177
32
22
10
33
1.89
17232--17315
28
2.9
30
84
8
104
25
30
15
28
1.96

Tables:   1

The End!