Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold631
Parameters: 2 7 7 80 10 50 1000
Length:  41625

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
197--377
52
3.5
52
96
1
328
27
18
18
35
1.94
386--410
13
1.9
13
100
0
50
36
16
16
32
1.90
453--537
19
4.7
19
79
18
101
37
17
11
32
1.86
491--515
13
1.9
13
100
0
50
32
16
16
36
1.90
472--535
32
2.0
33
96
3
121
34
18
12
34
1.89
3768--3799
15
2.1
15
94
0
55
43
15
12
28
1.83
6625--6661
15
2.5
15
90
0
56
43
10
27
18
1.83
6898--6950
15
3.4
16
77
15
58
22
1
1
73
1.03
12771--12885
10
11.1
10
66
7
50
25
28
7
38
1.84
12802--12875
22
3.5
22
75
7
80
25
25
10
37
1.88
12831--12929
32
3.1
32
89
0
117
28
24
10
37
1.88
13377--13461
36
2.5
34
82
14
104
31
15
23
29
1.95
14368--14431
33
2.0
32
87
3
92
28
14
17
40
1.88
15758--15782
13
1.9
13
100
0
50
32
20
16
32
1.94
15739--15801
32
1.9
33
87
3
92
38
20
14
26
1.91
16714--16749
16
2.2
16
90
0
54
58
11
16
13
1.63
18317--18353
13
2.8
13
95
0
65
32
16
18
32
1.93
18874--23493
956
4.8
957
91
1
7447
31
18
16
33
1.93
27467--27655
93
2.0
93
90
2
299
41
5
10
42
1.62
29926--29957
10
3.2
10
90
0
55
50
9
0
40
1.35
33988--34027
20
2.0
20
95
0
71
35
12
5
47
1.63
34799--34927
35
3.7
34
73
8
109
24
21
15
38
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34970--35103
32
4.2
32
79
0
99
32
25
14
26
1.95
34970--35103
64
2.1
63
80
1
142
32
25
14
26
1.95
35783--35966
67
2.7
67
77
1
163
36
19
21
22
1.95
41166--41196
10
3.1
10
90
0
53
22
29
6
41
1.78
41174--41279
51
2.1
52
92
1
178
32
18
12
36
1.88
41317--41360
20
2.2
20
83
0
52
38
11
15
34
1.84

Tables:   1

The End!