Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold632
Parameters: 2 7 7 80 10 50 1000
Length:  52786

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
444--562
1
119.0
1
71
0
85
85
13
0
0
0.64
443--568
11
11.5
11
81
9
141
84
14
0
0
0.72
445--568
32
3.8
32
87
4
169
84
13
0
0
0.71
443--568
6
21.0
6
76
18
95
84
14
0
0
0.72
4288--4423
33
4.1
33
97
0
254
41
13
17
27
1.88
4268--4441
20
9.8
19
70
25
132
41
13
16
27
1.86
4319--4441
53
2.3
53
83
8
153
42
14
17
26
1.87
4307--4403
13
8.4
13
73
25
101
40
14
17
27
1.89
7297--7328
7
4.6
7
100
0
64
31
0
0
68
0.90
7315--7759
167
2.7
168
83
5
469
27
12
7
52
1.66
7315--7763
164
2.7
168
81
6
490
27
12
7
52
1.66
9349--9602
131
1.9
130
86
2
357
34
9
11
44
1.73
10424--10482
32
1.9
30
83
13
75
59
10
10
20
1.58
10673--10711
20
2.0
20
85
5
53
38
10
10
41
1.73
10763--10788
13
2.0
13
100
0
52
30
15
15
38
1.88
11455--11595
59
2.4
59
97
0
264
33
23
5
37
1.78
12924--12966
20
2.1
20
82
4
50
9
27
44
18
1.80
13405--13442
13
2.9
13
96
0
67
31
15
18
34
1.92
17312--17356
21
2.1
21
84
8
56
22
20
4
53
1.63
19578--19603
13
2.0
13
100
0
52
30
15
15
38
1.88
29087--29161
20
3.8
19
82
3
87
34
12
12
41
1.79
29087--29164
40
2.0
39
85
7
104
34
11
12
41
1.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30074--30127
21
2.5
22
90
6
92
18
9
9
62
1.51
30081--30127
21
2.2
21
100
0
94
17
8
8
65
1.44
30081--30134
21
2.6
21
91
2
65
20
9
9
61
1.54
43184--43228
18
2.4
18
88
3
72
91
6
2
0
0.50
43182--43228
1
47.0
1
82
0
58
91
6
2
0
0.49
44485--45529
28
36.5
29
84
7
1212
28
31
18
22
1.97
44485--45529
57
18.2
57
84
7
1244
28
31
18
22
1.97
46090--46164
20
3.8
20
80
0
96
33
13
12
41
1.81
46090--46167
40
2.0
39
89
2
120
33
12
12
41
1.82
52090--52122
15
2.2
16
89
10
52
48
12
12
27
1.76

Tables:   1

The End!