Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold634
Parameters: 2 7 7 80 10 50 1000
Length:  42516

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
489--591
1
103.0
1
73
0
80
86
11
1
0
0.65
496--584
21
4.2
21
80
13
94
85
12
2
0
0.69
489--591
42
2.5
41
84
6
127
86
11
1
0
0.65
492--591
47
2.1
47
83
10
134
86
12
2
0
0.67
488--584
51
1.9
49
87
6
140
85
12
2
0
0.68
2032--2266
34
7.0
29
77
19
137
21
34
12
31
1.91
2056--2317
34
7.4
36
86
9
330
20
35
11
32
1.88
2056--2317
109
2.5
108
88
6
387
20
35
11
32
1.88
2056--2317
143
1.8
143
86
4
388
20
35
11
32
1.88
2302--2371
33
2.1
35
91
5
117
25
35
17
21
1.95
2371--2665
49
6.0
49
81
10
325
25
25
16
32
1.96
2463--2555
43
2.2
43
98
0
177
26
25
17
30
1.97
2465--2533
22
3.2
22
62
25
56
26
26
17
30
1.97
2417--2608
92
2.0
95
92
4
318
26
25
16
32
1.96
2509--2662
52
2.9
53
80
6
186
24
24
16
35
1.94
2509--3064
169
3.3
169
88
3
733
22
26
15
36
1.93
2755--2904
67
2.3
64
79
13
166
20
25
14
40
1.89
3661--3685
13
1.9
13
100
0
50
36
16
16
32
1.90
3749--3773
13
1.9
13
100
0
50
32
16
16
36
1.90
3782--3905
52
2.4
52
94
1
214
35
18
17
28
1.94
12717--12747
14
2.2
14
100
0
62
51
9
6
32
1.60
15211--15255
14
3.6
13
77
17
51
2
11
6
80
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15584--15942
155
2.3
155
82
3
440
49
8
9
32
1.65
20947--21008
20
3.0
21
79
11
65
72
1
20
4
1.12
20975--21011
10
3.9
9
86
13
56
75
0
16
8
1.02
27992--28037
24
2.0
23
87
12
67
73
8
10
6
1.23
29410--29507
34
2.7
35
82
7
117
35
22
13
28
1.92
29432--29499
34
2.0
34
94
0
118
33
22
13
30
1.92
30948--31003
19
2.9
19
91
2
85
35
17
16
30
1.92
30988--31014
13
2.1
13
100
0
54
40
14
14
29
1.86
31556--31632
22
3.5
22
89
3
120
25
33
2
37
1.70
33523--33547
13
1.9
13
100
0
50
32
16
16
36
1.90
33909--33933
13
1.9
13
100
0
50
36
16
16
32
1.90
33995--34022
13
2.2
13
100
0
56
28
14
17
39
1.89

Tables:   1

The End!