Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold641
Parameters: 2 7 7 80 10 50 1000
Length:  37418

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5011--5052
14
2.9
15
80
19
54
33
0
4
61
1.17
5783--5808
9
2.9
9
100
0
52
46
0
7
46
1.31
8807--8863
30
1.9
30
82
7
71
35
0
3
61
1.13
10250--10293
21
2.1
21
91
8
72
63
2
22
11
1.38
11470--11555
15
5.7
15
71
14
61
33
1
2
62
1.15
11987--12028
20
2.1
20
91
8
68
54
0
0
45
0.99
11983--12033
18
2.7
20
82
14
56
54
0
0
45
0.99
12607--12657
21
2.3
23
83
12
63
43
0
1
54
1.11
13124--13160
19
1.9
19
89
10
58
48
0
0
51
1.00
13199--13360
88
1.9
87
85
7
231
44
4
1
49
1.32
14335--14378
18
2.4
18
81
7
54
59
0
2
38
1.10
14356--14428
33
2.1
34
85
9
96
53
5
2
38
1.39
16183--16246
33
1.9
33
100
0
128
42
23
12
21
1.87
17628--17655
12
2.3
12
100
0
56
17
7
0
75
1.03
17634--17675
12
3.3
12
84
15
50
23
2
2
71
1.10
18961--19027
15
4.4
15
73
5
55
26
0
2
70
1.02
19947--19975
8
3.6
8
100
0
58
34
0
0
65
0.93
20114--20159
21
2.1
23
84
8
60
28
6
13
52
1.65
22296--22332
19
1.9
19
88
0
56
32
0
13
54
1.40
22770--22802
16
2.1
16
94
0
57
54
0
0
45
0.99
23076--23116
20
2.0
20
90
0
64
60
4
0
34
1.18
23364--23388
2
12.5
2
100
0
50
48
0
0
52
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24069--24111
20
2.3
19
84
11
61
51
6
0
41
1.29
26686--26715
15
2.0
15
93
0
51
33
6
23
36
1.81
30862--30891
7
4.4
7
91
8
53
0
0
13
86
0.57
30862--30891
13
2.2
14
94
5
53
0
0
13
86
0.57
31047--31093
20
2.3
20
88
3
76
23
8
25
42
1.82
31837--32085
128
2.0
126
88
3
374
32
10
24
32
1.89
32850--32880
2
15.5
2
100
0
62
48
0
0
51
1.00
36427--36452
2
13.0
2
100
0
52
50
0
0
50
1.00
36706--36802
48
2.0
49
87
2
142
34
11
14
40
1.82
37291--37355
34
1.9
34
87
6
96
36
15
9
38
1.79

Tables:   1

The End!