Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold654
Parameters: 2 7 7 80 10 50 1000
Length:  20928

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72--436
94
3.8
94
85
7
456
25
26
18
30
1.98
67--431
49
7.6
49
83
7
439
25
26
18
30
1.98
257--393
48
3.1
43
88
6
186
26
26
18
29
1.98
326--392
21
3.2
21
63
23
50
26
26
17
28
1.98
348--499
54
2.9
53
78
7
175
24
24
15
35
1.94
1298--1364
33
2.0
33
88
0
98
34
11
13
40
1.81
1318--1342
13
1.9
13
100
0
50
36
16
16
32
1.90
1440--1560
53
2.3
53
86
0
179
38
16
15
29
1.90
16871--16905
3
11.7
3
100
0
70
68
0
0
31
0.90
19583--19611
2
14.5
2
100
0
58
51
0
0
48
1.00
20642--20691
22
2.3
22
86
3
66
58
0
4
38
1.17
20773--20811
21
1.9
20
89
5
60
64
7
2
25
1.33

Tables:   1

The End!