Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold660
Parameters: 2 7 7 80 10 50 1000
Length:  24966

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
284--319
17
2.2
16
90
5
54
44
0
0
55
0.99
574--625
11
5.2
10
78
21
56
46
0
0
53
1.00
571--628
20
2.9
19
82
15
64
43
0
0
56
0.99
1280--1316
2
18.5
2
100
0
74
51
0
0
48
1.00
4467--4528
24
2.6
25
78
16
69
45
3
6
45
1.45
4502--4662
46
3.5
46
79
8
157
44
6
4
43
1.52
4920--4944
13
1.9
13
100
0
50
40
0
0
60
0.97
6377--6439
33
1.9
33
96
0
117
30
25
14
30
1.95
9016--9073
29
2.0
29
93
6
100
41
10
24
24
1.86
13646--13703
29
2.0
29
93
0
98
39
8
25
25
1.84
13649--13718
29
2.4
29
79
13
74
44
7
22
25
1.78
14504--14562
20
3.1
20
83
16
81
54
0
0
45
0.99
14517--14562
18
2.6
17
78
21
58
56
0
0
43
0.99
15257--15299
22
1.9
23
86
13
63
60
0
0
39
0.97
15701--15761
18
3.4
18
81
4
61
45
1
1
50
1.21
15701--15747
18
2.6
19
83
6
62
44
2
0
53
1.12
19252--19286
2
17.5
2
93
0
61
48
48
0
2
1.16
21659--21751
17
5.5
17
66
29
56
51
1
6
40
1.35
21660--21767
34
3.2
34
72
15
123
53
0
5
39
1.30
21623--21786
68
2.4
68
90
2
258
51
1
4
41
1.34
23197--23234
17
2.1
19
85
9
53
47
0
2
50
1.15
23596--23638
20
2.1
21
86
4
61
62
9
2
25
1.37

Tables:   1

The End!