Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold665
Parameters: 2 7 7 80 10 50 1000
Length:  38090

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
269--307
19
2.1
19
85
9
53
46
0
0
53
1.00
1022--1066
20
2.2
21
77
14
51
48
4
0
46
1.22
2657--2703
14
3.0
17
75
25
50
44
0
0
55
0.99
2678--2728
25
2.1
24
85
7
68
56
0
0
43
0.99
2760--2812
25
2.1
25
85
0
70
41
0
0
58
0.98
3502--3622
58
2.1
57
92
6
208
38
2
18
41
1.64
3839--3872
15
2.3
15
90
5
52
52
0
0
47
1.00
4774--4830
8
6.9
8
80
7
51
50
0
0
49
1.00
4803--4827
2
12.5
2
100
0
50
52
0
0
48
1.00
6451--6667
34
6.4
34
88
1
294
24
7
27
40
1.82
6451--6669
67
3.3
67
88
1
321
24
7
27
40
1.82
6972--7034
19
3.3
19
90
0
90
28
17
19
34
1.94
11100--11317
34
6.5
34
88
1
296
24
7
27
40
1.82
11100--11319
67
3.3
67
88
1
323
24
7
27
40
1.82
13406--13471
12
5.2
12
81
7
60
63
3
1
31
1.19
13434--13470
7
5.6
7
84
9
51
62
0
0
37
0.96
13427--13470
14
3.4
14
90
6
58
63
0
0
36
0.95
13929--14113
34
5.5
34
84
1
239
27
8
24
40
1.83
13929--14111
101
1.8
101
91
2
305
27
8
24
40
1.83
14418--14480
19
3.3
19
90
0
90
28
17
19
34
1.94
18546--18730
34
5.5
33
85
2
235
27
7
25
40
1.82
19492--19546
28
2.0
28
82
7
67
52
0
1
45
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20074--20116
16
2.7
15
82
10
50
20
2
23
53
1.57
20301--20339
20
2.0
19
95
5
69
41
5
0
53
1.23
21412--21446
16
2.2
16
94
0
61
28
2
5
62
1.32
25987--26021
2
17.5
2
100
0
70
0
51
0
48
1.00
29287--29320
17
1.9
18
88
5
52
20
2
2
73
1.09
29332--29405
25
2.9
25
95
4
130
21
10
10
56
1.64
29896--29932
2
18.5
2
100
0
74
48
0
51
0
1.00
33577--33622
21
2.1
22
84
4
58
19
30
19
30
1.97
36186--36265
28
2.9
27
78
12
81
46
21
7
25
1.77

Tables:   1

The End!