Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold668
Parameters: 2 7 7 80 10 50 1000
Length:  46421

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3159--3276
58
2.0
59
90
3
184
38
22
13
26
1.91
8461--8502
16
2.6
17
77
11
52
71
0
0
28
0.86
15207--15257
14
3.6
14
82
10
59
37
0
0
62
0.95
15207--15250
8
5.9
8
75
24
51
38
0
0
61
0.96
15211--15260
15
3.4
15
76
15
59
36
0
0
64
0.94
16742--16792
14
3.6
14
84
5
75
66
0
0
33
0.92
27895--27928
2
17.0
2
100
0
68
50
0
50
0
1.00
35414--35459
2
23.0
2
90
0
74
52
2
0
45
1.13
38549--38716
84
2.0
84
100
0
336
42
10
23
22
1.85
43464--43501
17
2.2
17
86
9
51
65
2
0
31
1.06
43716--43773
8
7.7
7
79
9
53
65
5
3
25
1.29
44090--44175
33
2.7
30
85
7
100
41
2
1
54
1.20
44118--44153
18
1.9
19
88
5
56
47
0
0
52
1.00
44119--44180
30
2.1
30
93
6
108
45
0
0
54
0.99
44119--44172
17
3.4
17
75
17
62
44
0
0
55
0.99
44134--44181
17
3.3
14
76
18
53
45
0
0
54
0.99
45874--45908
1
35.0
1
100
0
70
0
100
0
0
0.00
46167--46244
28
2.8
28
82
7
95
48
1
1
48
1.17
46243--46311
32
2.2
31
84
2
84
52
11
7
28
1.64
46251--46318
32
2.1
32
83
0
82
54
10
5
29
1.58

Tables:   1

The End!