Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold674
Parameters: 2 7 7 80 10 50 1000
Length:  41320

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
454--617
29
5.7
29
81
5
170
36
22
4
36
1.74
2068--2104
2
18.5
2
100
0
74
48
0
0
51
1.00
2292--2317
5
5.2
5
100
0
52
80
0
0
19
0.71
2314--2347
17
1.9
18
94
5
61
64
2
2
29
1.22
2289--2351
6
10.7
6
75
13
51
68
1
1
28
1.08
2292--2353
17
3.6
18
78
18
60
69
1
1
27
1.07
5025--5058
16
2.2
16
89
5
52
2
38
2
55
1.30
9060--9176
42
2.8
42
80
6
128
45
16
10
28
1.80
12111--12138
2
14.0
2
100
0
56
50
0
0
50
1.00
13195--13255
17
3.6
16
78
14
52
37
1
0
60
1.07
13203--13266
14
4.3
15
73
13
60
39
0
0
60
0.97
13204--13306
38
2.7
36
77
12
100
41
0
0
57
1.05
13206--13271
16
4.3
16
74
14
68
39
0
0
60
0.97
13246--13304
31
1.9
31
89
0
91
45
0
1
52
1.10
15100--15175
39
2.0
38
86
2
107
25
3
13
57
1.53
15356--15392
19
2.0
18
94
5
65
45
0
5
48
1.25
16078--16153
24
2.9
27
75
16
79
61
2
1
34
1.18
17411--17488
40
1.9
41
92
2
131
46
7
12
33
1.71
18332--18422
45
2.0
45
84
0
119
39
5
25
29
1.78
21084--21157
24
3.0
24
66
16
62
35
21
12
31
1.90
27261--27325
32
2.0
32
100
0
130
24
24
30
20
1.98
31711--31805
14
7.4
13
75
17
76
81
14
4
0
0.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33230--33567
30
11.6
30
82
5
390
31
31
16
20
1.95
33230--33526
59
5.1
59
87
1
409
29
31
17
20
1.96
33230--33542
117
2.7
117
89
3
461
30
31
16
20
1.95
33594--33882
98
3.0
97
83
7
347
24
25
15
33
1.95
33584--33882
49
6.1
49
78
9
310
24
25
15
33
1.95
34720--34770
19
2.7
19
96
0
93
31
11
17
39
1.86
34823--34847
13
1.9
13
100
0
50
32
16
16
36
1.90
34856--34984
52
2.5
52
92
0
213
34
16
19
29
1.93

Tables:   1

The End!