Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold677
Parameters: 2 7 7 80 10 50 1000
Length:  18889

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
411--469
20
2.8
20
80
14
75
54
0
0
45
0.99
377--446
32
2.2
33
80
12
83
50
0
0
50
1.00
382--469
17
5.0
18
73
13
58
52
0
0
47
1.00
418--473
26
2.2
26
81
12
62
51
0
0
48
1.00
8433--8459
5
5.4
5
100
0
54
22
0
0
77
0.76
9835--9894
15
4.4
14
75
21
56
65
1
0
33
1.03
11303--11335
14
2.4
14
90
5
50
87
0
12
0
0.53
12115--12182
33
2.1
33
100
0
136
41
17
17
23
1.90
12752--12914
30
5.6
30
85
11
216
11
15
44
28
1.81
12752--12885
55
2.4
55
95
3
234
10
16
44
28
1.80
12752--12922
85
2.0
86
89
7
269
10
15
45
28
1.79
13111--13148
19
2.1
19
85
9
53
50
0
0
50
1.00
13368--13401
17
1.9
17
88
5
50
26
0
0
73
0.83
13792--13827
15
2.2
17
90
9
58
58
2
0
38
1.13
13845--13910
27
2.3
30
82
12
84
46
1
0
51
1.10
13873--13911
20
1.9
21
89
5
62
46
0
0
53
1.00
15027--15086
23
2.9
20
79
15
68
53
0
1
45
1.10
15034--15079
23
2.0
24
91
4
76
54
0
0
45
0.99
15338--15371
2
17.0
2
88
11
52
50
2
0
47
1.16
16615--16652
14
2.7
14
84
11
51
23
0
0
76
0.79

Tables:   1

The End!