Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold681
Parameters: 2 7 7 80 10 50 1000
Length:  27627

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38--83
23
2.1
21
84
15
58
56
0
2
41
1.11
63--91
14
2.0
15
93
6
51
65
0
6
27
1.18
4835--4860
13
2.0
13
100
0
52
30
15
15
38
1.88
5650--6005
156
2.3
155
76
6
344
29
14
16
39
1.88
5761--6132
154
2.4
156
80
5
414
28
13
16
41
1.86
6554--6628
20
3.8
20
76
0
87
34
13
10
41
1.79
6554--6631
40
2.0
39
87
2
111
34
12
11
41
1.80
7513--7551
20
1.9
21
84
5
53
20
10
10
58
1.59
13652--13698
16
3.1
16
82
17
64
72
10
12
4
1.25
13680--13728
21
2.4
21
80
10
57
71
8
12
8
1.31
15041--15315
27
10.1
27
85
2
345
24
32
14
29
1.94
15295--15769
32
15.5
32
83
4
452
29
29
19
21
1.98
15971--16201
28
8.0
28
88
5
309
28
32
17
22
1.96
15971--16201
57
4.0
56
87
5
309
28
32
17
22
1.96
15543--16400
429
2.0
437
92
2
1446
27
28
17
26
1.98
15965--16201
85
2.7
85
90
3
357
27
32
17
22
1.96
16764--16835
20
3.6
20
78
0
90
34
13
9
41
1.78
16761--16838
40
2.0
39
92
2
129
34
12
11
41
1.80
20065--20344
149
1.9
149
84
3
375
27
12
19
40
1.87
23279--23303
11
2.3
11
100
0
50
24
0
8
68
1.16

Tables:   1

The End!