Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold686
Parameters: 2 7 7 80 10 50 1000
Length:  26827

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3062--3099
20
1.9
20
88
0
58
28
23
10
36
1.88
9020--9090
26
2.6
28
80
8
85
40
1
5
52
1.34
9024--9151
13
9.8
13
69
16
59
46
3
2
46
1.33
9037--9102
20
3.2
21
77
20
59
40
3
4
51
1.38
10402--10446
20
2.2
21
84
4
56
75
2
4
17
1.07
15165--15227
31
2.0
31
96
0
117
30
11
15
42
1.82
15751--15777
13
2.1
13
100
0
54
29
14
14
40
1.86
15842--15894
13
4.5
13
71
26
55
33
13
16
35
1.88
15826--15894
33
2.1
33
86
5
95
33
13
17
36
1.88
17625--17658
17
2.0
17
100
0
68
58
11
23
5
1.55
18134--18176
21
2.1
20
83
12
52
53
6
13
25
1.65
18134--18176
20
2.1
21
83
12
54
53
6
13
25
1.65
24754--24803
20
2.5
20
87
6
66
2
14
0
84
0.72
24754--24802
10
4.9
10
78
9
55
2
14
0
83
0.73
24752--24806
8
6.9
8
80
12
60
1
14
0
83
0.73
24752--24820
32
2.0
36
83
10
92
2
17
0
79
0.85
25352--25790
165
2.6
163
78
10
417
50
7
10
30
1.66

Tables:   1

The End!