Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold692
Parameters: 2 7 7 80 10 50 1000
Length:  28653

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
610--663
21
2.6
21
75
0
54
53
0
1
44
1.11
5640--5681
2
21.5
2
81
13
52
52
2
0
45
1.13
6573--6618
18
2.6
18
89
3
67
54
0
0
45
0.99
6910--6943
15
2.1
16
89
10
52
41
0
11
47
1.40
7191--7226
17
2.1
18
89
5
56
33
0
0
66
0.92
8016--8054
19
2.1
19
90
4
62
51
0
0
48
1.00
8840--8878
2
19.5
2
100
0
78
51
0
0
48
1.00
8966--9021
23
2.5
23
81
16
64
39
0
1
58
1.08
8966--9003
12
3.4
11
86
13
51
39
0
0
60
0.97
9576--9606
9
3.4
9
95
0
53
90
0
3
6
0.55
10201--10254
13
3.9
13
72
13
54
38
3
0
57
1.17
10235--10271
18
2.0
19
94
5
67
35
0
0
64
0.94
10201--10271
29
2.4
31
80
4
83
36
2
0
60
1.11
10416--10450
17
2.0
18
88
5
54
51
0
0
48
1.00
10416--10458
22
2.0
22
86
13
63
51
0
0
48
1.00
11347--11387
21
2.0
21
90
4
66
53
4
0
41
1.22
16603--16638
7
5.1
7
96
0
54
33
30
27
8
1.86
17197--17233
2
18.5
2
100
0
74
0
48
0
51
1.00
19635--19671
2
18.5
2
100
0
74
0
48
0
51
1.00
20523--20569
15
3.2
15
78
6
60
65
2
0
31
1.04
20514--20576
29
2.1
30
91
2
101
60
1
1
36
1.16
20526--20575
14
3.5
14
78
5
55
66
2
2
30
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20514--20599
29
2.9
29
85
5
100
56
1
1
40
1.14
21102--21157
22
2.6
23
69
11
55
66
0
0
33
0.92
21103--21142
20
2.0
21
85
5
55
70
0
0
30
0.88
21111--21144
16
2.1
16
88
0
50
67
0
0
32
0.91
23051--23085
17
2.1
17
88
0
52
37
0
0
62
0.95
23080--23126
21
2.2
22
85
14
64
61
2
0
36
1.08
23084--23137
18
3.2
17
75
21
51
61
1
0
37
1.07
27350--27393
23
1.9
23
90
0
70
68
2
0
29
1.02
27356--27422
29
2.2
32
82
15
88
59
0
0
40
0.97
27356--27440
26
3.2
25
77
12
64
57
0
0
42
0.98
28105--28169
29
2.3
29
86
2
87
44
4
0
50
1.22

Tables:   1

The End!