Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold697
Parameters: 2 7 7 80 10 50 1000
Length:  26651

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1139--1173
3
11.7
3
100
0
70
31
0
0
68
0.90
5582--5642
27
2.3
27
91
0
95
29
18
40
11
1.85
5911--5945
18
1.9
18
88
0
52
28
20
42
8
1.81
6590--6642
26
2.1
25
92
3
88
26
16
35
20
1.94
6671--6797
59
2.2
59
89
0
191
17
15
32
34
1.91
13647--13718
28
2.6
28
81
0
81
25
18
33
23
1.97
13729--13827
51
1.9
51
85
2
135
38
9
19
33
1.83
16188--16215
13
2.2
13
100
0
56
39
17
14
28
1.89
16169--16235
33
2.0
33
91
0
107
44
14
14
25
1.84
16258--16282
13
1.9
13
100
0
50
32
16
16
36
1.90
16468--16502
7
5.1
7
86
6
54
40
34
0
25
1.56
18273--18311
19
2.0
20
85
5
53
46
0
7
46
1.31
20913--20955
2
21.5
2
95
0
77
48
0
2
48
1.14
20946--21004
29
2.0
29
100
0
118
37
10
13
38
1.79
22005--22039
2
18.0
2
88
5
54
51
2
0
45
1.16
23332--23367
2
18.0
2
100
0
72
50
0
0
50
1.00
26458--26501
2
22.5
2
95
4
81
50
0
0
50
1.00

Tables:   1

The End!