Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold703
Parameters: 2 7 7 80 10 50 1000
Length:  67588

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
564--609
24
1.9
24
86
0
65
41
28
6
23
1.79
604--667
28
2.3
28
91
5
103
53
20
7
18
1.69
614--668
28
2.0
28
100
0
110
49
21
10
18
1.78
1356--1402
3
15.7
3
100
0
94
65
0
34
0
0.93
2032--2085
22
2.4
23
85
14
69
50
1
1
46
1.23
2032--2106
37
1.9
36
82
12
87
46
1
4
48
1.29
2037--2096
25
2.4
25
81
8
70
48
1
3
46
1.28
3082--3262
91
2.0
90
95
1
326
42
8
4
44
1.56
3362--3419
26
2.2
27
81
9
66
44
3
3
48
1.36
5475--5551
31
2.6
29
79
4
82
32
5
9
53
1.55
10085--10124
3
13.3
3
100
0
80
67
0
0
32
0.91
16299--16354
20
2.8
19
81
7
67
67
0
5
26
1.11
16811--16854
2
21.5
2
95
4
79
50
0
2
47
1.13
18315--18352
2
18.5
2
89
10
51
47
0
5
47
1.24
20413--20450
2
19.0
2
88
0
58
44
0
5
50
1.24
20354--20482
69
1.9
68
91
4
215
31
12
5
50
1.63
23462--23537
23
3.2
24
81
9
93
47
1
3
47
1.29
24038--24137
38
2.6
38
84
3
121
39
0
13
48
1.42
25799--25823
13
1.9
13
100
0
50
32
16
16
36
1.90
25782--25846
33
2.0
32
88
8
96
38
16
13
30
1.88
26968--27001
5
6.8
5
89
0
50
76
20
0
2
0.92
28848--28924
31
2.6
29
79
4
82
32
5
9
53
1.55
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30963--31195
50
4.6
50
88
2
324
28
18
20
32
1.96
33130--33362
50
4.6
50
89
1
340
29
19
20
30
1.97
36253--36313
3
20.0
3
93
3
104
63
1
0
34
1.04
36329--36366
14
2.7
14
100
0
76
44
7
18
28
1.78
41555--41598
3
14.7
3
100
0
88
65
0
34
0
0.93
42202--42262
26
2.3
27
83
8
72
47
3
3
45
1.35
42240--42290
26
2.0
24
81
7
57
50
1
1
45
1.24
42235--42301
24
2.8
26
82
10
81
47
1
2
47
1.26
44376--44439
31
2.1
30
91
2
101
31
7
3
57
1.43
46275--46316
2
21.0
2
100
0
84
50
0
0
50
1.00
46314--46340
4
6.8
4
100
0
54
25
0
22
51
1.48
57184--57264
28
2.9
27
82
12
101
46
23
7
22
1.76
57194--57264
27
2.6
27
88
6
99
46
23
7
22
1.76
58700--58745
21
2.1
22
84
4
58
19
30
19
30
1.97
64360--64396
15
2.5
15
86
0
56
27
0
8
64
1.21
65520--65560
22
1.9
22
90
5
66
53
2
0
43
1.13
66170--66198
2
14.5
2
100
0
58
48
0
0
51
1.00
66915--66951
11
3.4
11
84
0
56
37
0
0
62
0.96
67211--67260
20
2.5
21
81
15
70
40
2
0
58
1.10
66919--67559
309
2.1
307
87
5
918
38
6
5
48
1.54
67502--67549
22
2.2
22
81
7
53
33
2
0
64
1.05

Tables:   1

The End!