Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold704
Parameters: 2 7 7 80 10 50 1000
Length:  26163

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
89--205
40
2.9
39
87
9
173
49
8
16
25
1.73
3930--3983
16
3.2
17
80
17
67
72
0
0
27
0.85
3938--3984
15
2.9
16
78
12
51
76
0
0
23
0.78
8616--8702
2
49.0
2
67
22
52
43
0
1
55
1.07
8621--8702
30
2.9
28
75
16
80
42
0
1
56
1.07
8629--8696
25
2.6
27
82
13
81
44
0
0
55
0.99
8619--8666
19
2.5
19
83
10
53
37
0
2
60
1.09
8537--8702
56
2.9
56
79
13
155
45
0
1
53
1.08
8971--9063
23
4.2
21
74
19
57
58
1
1
39
1.13
9630--9722
31
3.0
31
77
12
84
58
1
1
39
1.13
14929--14963
2
18.0
2
88
5
54
0
48
0
51
1.00
22957--23040
31
2.7
32
77
14
86
42
3
2
51
1.32
24540--24567
2
14.0
2
100
0
56
0
50
0
50
1.00
25950--26048
16
5.9
16
66
26
53
40
1
0
58
1.05
25953--25994
20
2.1
20
86
8
59
35
2
0
61
1.09
26008--26057
16
3.2
16
78
13
50
40
0
0
60
0.97

Tables:   1

The End!