Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold705
Parameters: 2 7 7 80 10 50 1000
Length:  47582

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3087--3221
50
2.7
49
91
2
207
25
18
14
40
1.89
4305--4343
4
9.8
4
94
0
69
23
2
0
74
0.94
8764--8839
12
6.9
11
75
15
52
39
2
48
9
1.49
8754--8872
42
2.8
42
93
0
202
42
1
46
9
1.46
8829--8878
18
2.8
18
81
6
57
44
2
46
8
1.44
16198--16264
33
2.0
33
94
0
116
29
17
22
29
1.97
21191--21229
13
3.0
13
85
7
53
30
0
2
66
1.05
22525--22745
34
6.5
33
81
8
248
40
25
7
26
1.82
22525--22745
102
2.2
101
86
3
327
40
25
7
26
1.82
27123--27342
34
6.5
33
82
9
264
40
26
7
24
1.82
27125--27342
68
3.2
67
85
3
294
40
26
7
24
1.82
27123--27342
102
2.2
101
89
1
350
40
26
7
24
1.82
27912--27955
5
8.6
5
97
2
79
18
2
0
79
0.83
30653--30701
17
2.8
17
79
14
55
34
0
8
57
1.29
31023--31068
23
2.0
24
91
4
76
56
2
4
36
1.31
32251--32307
3
19.0
3
92
0
96
66
0
3
29
1.08
32655--32690
3
12.0
3
93
0
63
2
30
0
66
1.06
38367--38415
25
2.0
25
84
8
64
59
0
0
40
0.98
38664--38718
3
18.3
3
96
0
101
30
0
1
67
1.01
38900--38946
20
2.4
20
82
3
60
40
4
19
36
1.71
41798--41827
6
5.0
6
95
0
51
0
53
16
30
1.44
43997--44037
2
20.5
2
100
0
82
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45474--45533
30
2.0
30
93
0
102
56
8
10
25
1.60
47077--47106
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!