Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold710
Parameters: 2 7 7 80 10 50 1000
Length:  25100

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
510--545
16
2.3
15
90
4
54
80
0
0
19
0.71
1315--1364
22
2.2
23
78
3
57
52
0
0
48
1.00
1336--1372
13
2.8
13
91
4
56
51
0
0
48
1.00
1572--1605
2
17.0
2
100
0
68
50
0
0
50
1.00
2143--2186
2
23.0
2
81
9
56
47
2
2
47
1.27
3478--3534
24
2.3
26
75
6
64
36
1
0
61
1.07
3960--4026
22
2.9
23
82
10
75
52
0
1
46
1.09
3964--4046
37
2.2
37
85
6
123
51
0
2
45
1.14
3999--4052
22
2.4
22
81
9
56
48
0
3
48
1.19
5167--5217
23
2.2
24
79
10
61
49
0
0
50
1.00
9061--9102
19
2.2
19
83
8
50
57
0
0
42
0.99
13207--13247
2
20.5
2
94
0
73
53
0
46
0
1.00
14145--14243
14
7.1
14
72
7
78
29
21
19
30
1.97
14145--14244
27
3.6
27
70
8
76
30
21
19
30
1.97
14181--14277
27
3.6
27
75
1
95
27
24
21
25
1.99
14181--14279
14
7.2
14
72
4
76
28
24
22
25
1.99
14837--14875
17
2.6
14
78
21
51
28
15
17
38
1.91
23619--24242
210
3.0
207
91
4
976
49
6
3
40
1.47
24087--24141
21
2.6
23
77
11
64
60
1
0
38
1.08
24633--24693
21
2.7
22
76
21
63
65
1
1
31
1.12
24638--24701
33
1.9
33
84
12
87
67
1
1
29
1.09
24633--24698
23
2.7
25
77
15
66
65
1
1
31
1.11

Tables:   1

The End!