Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold717
Parameters: 2 7 7 80 10 50 1000
Length:  37141

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3846--3990
20
7.1
20
81
9
136
34
13
20
31
1.91
3846--3982
41
3.4
41
87
6
190
35
13
19
32
1.90
4890--5280
28
13.4
29
85
6
458
23
17
30
28
1.97
6968--7168
79
2.6
78
83
4
226
29
16
28
25
1.97
7120--7196
28
2.8
28
85
0
91
23
20
33
22
1.97
7180--7518
52
6.4
52
66
18
162
31
12
25
30
1.92
7336--7406
27
2.6
27
88
2
97
22
21
32
23
1.98
7066--7460
107
3.7
105
70
13
293
30
14
27
27
1.95
7395--7523
51
2.4
51
78
12
134
33
10
24
32
1.88
9890--9915
13
2.0
13
100
0
52
38
15
15
30
1.88
9869--9935
33
2.0
33
88
0
98
43
16
14
25
1.86
9955--10022
19
3.9
18
76
23
83
38
14
11
35
1.83
9977--10001
13
1.9
13
100
0
50
32
16
16
36
1.90
9958--10020
32
2.0
32
96
0
117
36
15
12
34
1.86
10058--10135
21
3.8
21
86
8
115
32
12
16
38
1.87
10058--10139
41
2.0
40
88
6
121
32
12
17
37
1.86
10787--10842
17
3.4
16
85
9
76
5
0
8
85
0.73
10799--10842
11
3.9
11
84
3
61
4
0
9
86
0.70
10787--10854
16
4.0
18
81
7
63
5
2
10
80
0.98
15583--15656
19
3.7
19
87
5
85
36
18
16
28
1.93
16178--16221
19
2.4
19
84
3
54
34
34
2
29
1.70
16190--16230
19
2.2
19
95
0
73
26
36
2
34
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24188--24244
19
2.9
19
89
5
78
35
17
15
31
1.92
24229--24288
13
5.1
13
69
22
60
40
16
16
26
1.90
24242--24307
20
3.7
20
73
26
83
39
18
18
24
1.92
24210--24307
33
3.0
33
95
1
171
39
17
17
25
1.91
35573--35612
1
40.0
1
92
0
53
92
0
2
5
0.45
35570--35605
18
2.0
18
100
0
72
83
0
5
11
0.80

Tables:   1

The End!