Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold724
Parameters: 2 7 7 80 10 50 1000
Length:  40505

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15453--15506
20
2.7
20
82
2
63
31
20
11
37
1.88
16140--16513
52
7.2
51
70
13
143
41
15
19
22
1.89
16157--16355
103
1.9
105
83
2
258
38
17
22
22
1.93
20942--20987
20
2.3
20
80
0
56
34
21
8
34
1.84
22235--22468
79
2.9
78
75
8
213
32
13
26
26
1.94
22423--22494
28
2.6
27
84
8
83
22
18
36
23
1.95
22516--22707
51
3.7
51
84
4
251
35
9
22
32
1.87
22483--22707
104
2.2
103
86
4
310
33
9
23
33
1.87
22483--22707
51
4.3
53
83
7
250
33
9
23
33
1.87
25041--25066
13
2.0
13
100
0
52
38
15
15
30
1.88
25053--25093
21
2.0
21
100
0
82
29
19
9
41
1.83
25106--25179
30
2.4
31
88
4
105
31
16
14
37
1.89
25105--25160
13
4.0
13
78
17
58
30
16
16
37
1.90
25313--25346
17
2.0
17
94
0
59
44
11
20
23
1.84
26720--26764
22
2.0
23
87
12
67
48
4
15
31
1.65
26720--26764
23
2.0
22
86
4
63
48
4
15
31
1.65
31589--31658
28
2.5
28
79
6
79
34
28
14
22
1.93
31577--31735
56
2.8
55
74
7
158
33
25
16
23
1.96
31610--31774
28
5.9
28
73
12
124
33
24
16
24
1.96
31452--31770
112
2.9
110
76
12
301
32
22
17
26
1.96
34319--34352
16
2.1
17
88
5
52
35
14
5
44
1.70
36126--36164
20
2.0
20
95
5
71
51
5
7
35
1.53
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37364--37461
21
4.7
21
89
5
146
36
12
17
33
1.87
37497--37564
19
3.9
19
76
21
76
35
13
14
36
1.85
37518--37542
13
1.9
13
100
0
50
36
16
16
32
1.90
37499--37561
32
2.0
32
93
0
108
34
14
15
34
1.88
37604--37629
13
2.0
13
100
0
52
30
15
15
38
1.88
37584--37650
33
2.0
33
88
0
98
25
14
16
43
1.86

Tables:   1

The End!