Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold731
Parameters: 2 7 7 80 10 50 1000
Length:  52511

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7564--7590
3
9.0
3
100
0
54
33
0
0
66
0.92
8362--8399
16
2.4
17
82
13
53
71
0
0
28
0.87
8729--8770
16
2.6
16
84
3
57
59
0
0
40
0.97
9352--9466
35
3.3
35
91
3
178
20
7
4
66
1.34
9838--9862
6
4.2
6
100
0
50
84
0
0
16
0.63
14452--14718
146
1.8
147
85
0
383
47
11
7
33
1.69
14713--14759
19
2.4
19
76
20
51
48
4
8
38
1.53
19141--19170
14
2.1
14
100
0
60
73
13
6
6
1.24
19845--19877
2
16.5
2
100
0
66
48
0
0
51
1.00
21659--21720
16
3.9
16
75
8
54
27
11
12
48
1.76
21652--21716
32
2.0
32
87
0
94
29
9
13
47
1.74
26199--26318
52
2.3
52
95
0
213
29
16
18
35
1.93
26190--26338
52
2.9
51
86
4
201
31
15
17
35
1.91
26327--26351
13
1.9
13
100
0
50
36
16
16
32
1.90
26391--26460
33
2.1
33
89
0
104
40
14
11
34
1.82
26416--26440
13
1.9
13
100
0
50
32
16
16
36
1.90
27973--28066
36
2.6
36
98
0
179
11
18
42
27
1.85
28244--28282
20
2.0
19
85
5
51
23
12
41
23
1.88
28626--28696
5
14.2
5
89
0
88
52
7
19
21
1.70
28618--28714
15
6.5
15
84
1
106
50
8
20
20
1.73
28624--28714
20
4.6
20
87
0
128
49
8
20
20
1.75
28624--28708
5
17.0
5
85
4
82
48
9
21
21
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28626--28704
10
7.9
10
85
0
95
49
7
21
21
1.74
28726--28863
43
3.3
43
89
7
214
47
8
18
25
1.77
28788--28872
38
2.3
38
95
4
156
47
10
18
23
1.80
29299--30022
42
16.9
42
80
7
785
36
20
30
12
1.90
29299--30023
85
8.4
85
80
8
770
36
20
30
12
1.90
29339--30021
127
5.3
126
81
6
759
36
20
30
12
1.90
29848--29950
53
2.0
51
86
3
143
36
21
27
14
1.92
29804--29992
95
2.0
92
84
6
245
35
21
28
14
1.92
43255--43348
5
18.8
5
87
0
107
50
7
21
21
1.73
43243--43348
15
7.2
15
84
6
128
49
8
20
21
1.76
43357--43433
22
3.5
22
70
22
81
44
9
20
25
1.81
43336--43437
43
2.4
43
91
3
161
42
8
19
29
1.81
43376--43446
22
3.3
22
66
14
58
38
11
22
28
1.88
43380--43498
61
2.0
61
98
0
229
42
10
20
27
1.84
43620--43679
17
3.7
17
76
12
56
25
0
5
70
1.08
44274--44329
19
2.9
19
86
2
76
35
16
16
32
1.90
44314--44339
13
2.0
13
100
0
52
38
15
15
30
1.88
45239--45268
13
2.3
13
94
0
51
43
13
13
30
1.82
49522--49559
20
1.9
20
94
0
67
39
13
15
31
1.86
49522--49574
20
2.7
20
82
5
63
37
15
15
32
1.88

Tables:   1

The End!