Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold732
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 61618
ACGTcount: A:0.35, C:0.15, G:0.16, T:0.34
Found at i:5937 original size:150 final size:152
Alignment explanation
Indices: 5663--5963 Score: 543
Period size: 150 Copynumber: 2.0 Consensus size: 152
5653 AAACATTTTG
5663 TGACTTGTACACAATAGTGAACCATAACATGAAGATGAAAGGGAAAAAAAAACAACTCTTTCAAT
1 TGACTTGTACACAATAGTGAACCATAACATGAAGATGAAAGGG-AAAAAAAACAACTCTTTCAAT
5728 CACTTAGCAATCAACCATAAAACATATGAACACATAAATTAACTAGAAAAGATGCATGCATTGAA
65 CACTTAGCAATCAACCATAAAACATATGAACACATAAATTAACTAGAAAAGATGCATGCATTGAA
5793 GCTGTACATGCATCAAATGATGA
130 GCTGTACATGCATCAAATGATGA
* * *
5816 TGACTTGTACGCAATGGTGAACCATAACATGAAGATGAAAGGG-AAAAAAATAACTCTTTCAATC
1 TGACTTGTACACAATAGTGAACCATAACATGAAGATGAAAGGGAAAAAAAACAACTCTTTCAATC
*
5880 AC-TAGCAATCAACCATAAAACATGTGAACACATAAATTAACTAGAAAAGATGCATGCATTGAAG
66 ACTTAGCAATCAACCATAAAACATATGAACACATAAATTAACTAGAAAAGATGCATGCATTGAAG
5944 CTGTACATGCATCAAATGAT
131 CTGTACATGCATCAAATGAT
5964 TATGTAAAGC
Statistics
Matches: 144, Mismatches: 4, Indels: 3
0.95 0.03 0.02
Matches are distributed among these distances:
150 81 0.56
151 22 0.15
153 41 0.28
ACGTcount: A:0.45, C:0.17, G:0.15, T:0.23
Consensus pattern (152 bp):
TGACTTGTACACAATAGTGAACCATAACATGAAGATGAAAGGGAAAAAAAACAACTCTTTCAATC
ACTTAGCAATCAACCATAAAACATATGAACACATAAATTAACTAGAAAAGATGCATGCATTGAAG
CTGTACATGCATCAAATGATGA
Found at i:11443 original size:20 final size:20
Alignment explanation
Indices: 11418--11455 Score: 76
Period size: 20 Copynumber: 1.9 Consensus size: 20
11408 GTCAAAACCC
11418 AAAATGTATCGATACATTAA
1 AAAATGTATCGATACATTAA
11438 AAAATGTATCGATACATT
1 AAAATGTATCGATACATT
11456 TTCATTCTAG
Statistics
Matches: 18, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
20 18 1.00
ACGTcount: A:0.47, C:0.11, G:0.11, T:0.32
Consensus pattern (20 bp):
AAAATGTATCGATACATTAA
Found at i:16967 original size:2 final size:2
Alignment explanation
Indices: 16955--16990 Score: 63
Period size: 2 Copynumber: 18.0 Consensus size: 2
16945 ATTTGTTTTC
*
16955 AT AT CT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
16991 CTTCGATCTC
Statistics
Matches: 32, Mismatches: 2, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
2 32 1.00
ACGTcount: A:0.47, C:0.03, G:0.00, T:0.50
Consensus pattern (2 bp):
AT
Found at i:18207 original size:13 final size:13
Alignment explanation
Indices: 18189--18214 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
18179 TATACCAAGT
18189 ATGTATCGATACA
1 ATGTATCGATACA
18202 ATGTATCGATACA
1 ATGTATCGATACA
18215 CAAAAAATTG
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.38, C:0.15, G:0.15, T:0.31
Consensus pattern (13 bp):
ATGTATCGATACA
Found at i:20467 original size:21 final size:22
Alignment explanation
Indices: 20421--20465 Score: 67
Period size: 21 Copynumber: 2.1 Consensus size: 22
20411 TTGCAAGATG
20421 AAATAAAGAAGTTAGCTAATGA
1 AAATAAAGAAGTTAGCTAATGA
*
20443 AAATAATG-AGTTAGCTAA-GA
1 AAATAAAGAAGTTAGCTAATGA
20463 AAA
1 AAA
20466 ATGAAAACTT
Statistics
Matches: 22, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
20 5 0.23
21 10 0.45
22 7 0.32
ACGTcount: A:0.56, C:0.04, G:0.18, T:0.22
Consensus pattern (22 bp):
AAATAAAGAAGTTAGCTAATGA
Found at i:22289 original size:15 final size:15
Alignment explanation
Indices: 22269--22299 Score: 53
Period size: 15 Copynumber: 2.1 Consensus size: 15
22259 TAAAAATGTC
*
22269 CAAAATGAGGAAGCT
1 CAAAATGAAGAAGCT
22284 CAAAATGAAGAAGCT
1 CAAAATGAAGAAGCT
22299 C
1 C
22300 CAAACGAAAT
Statistics
Matches: 15, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
15 15 1.00
ACGTcount: A:0.48, C:0.16, G:0.23, T:0.13
Consensus pattern (15 bp):
CAAAATGAAGAAGCT
Found at i:24387 original size:13 final size:13
Alignment explanation
Indices: 24369--24405 Score: 74
Period size: 13 Copynumber: 2.8 Consensus size: 13
24359 ACATTTTTCC
24369 TTGTATCGATACA
1 TTGTATCGATACA
24382 TTGTATCGATACA
1 TTGTATCGATACA
24395 TTGTATCGATA
1 TTGTATCGATA
24406 TAGGGTGATT
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 24 1.00
ACGTcount: A:0.30, C:0.14, G:0.16, T:0.41
Consensus pattern (13 bp):
TTGTATCGATACA
Found at i:24574 original size:20 final size:20
Alignment explanation
Indices: 24531--24576 Score: 58
Period size: 21 Copynumber: 2.2 Consensus size: 20
24521 AAATCTTTTG
24531 CAAAATACTTGTTTTTCACTT
1 CAAAATACTTGTTTTTCAC-T
*
24552 CAAATTACTTCGTTTTTCA-T
1 CAAAATACTT-GTTTTTCACT
24572 CAAAA
1 CAAAA
24577 CCAGCATCAA
Statistics
Matches: 22, Mismatches: 2, Indels: 3
0.81 0.07 0.11
Matches are distributed among these distances:
20 5 0.23
21 9 0.41
22 8 0.36
ACGTcount: A:0.33, C:0.20, G:0.04, T:0.43
Consensus pattern (20 bp):
CAAAATACTTGTTTTTCACT
Found at i:26246 original size:22 final size:23
Alignment explanation
Indices: 26191--26240 Score: 100
Period size: 23 Copynumber: 2.2 Consensus size: 23
26181 TTTTGATATG
26191 AATTACTTGATTAAGGGGGAGAA
1 AATTACTTGATTAAGGGGGAGAA
26214 AATTACTTGATTAAGGGGGAGAA
1 AATTACTTGATTAAGGGGGAGAA
26237 AATT
1 AATT
26241 TTTGATATGA
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
23 27 1.00
ACGTcount: A:0.40, C:0.04, G:0.28, T:0.28
Consensus pattern (23 bp):
AATTACTTGATTAAGGGGGAGAA
Found at i:27025 original size:20 final size:20
Alignment explanation
Indices: 26980--27031 Score: 70
Period size: 19 Copynumber: 2.6 Consensus size: 20
26970 GTAGCCAAAC
* **
26980 TTGTATCGATACACCAAGTA
1 TTGTATCGATACACAAAAAA
27000 -TGTATCGATACACAAAAAA
1 TTGTATCGATACACAAAAAA
27019 TTGTATCGATACA
1 TTGTATCGATACA
27032 TTGGCTTGTA
Statistics
Matches: 28, Mismatches: 3, Indels: 2
0.85 0.09 0.06
Matches are distributed among these distances:
19 16 0.57
20 12 0.43
ACGTcount: A:0.40, C:0.17, G:0.13, T:0.29
Consensus pattern (20 bp):
TTGTATCGATACACAAAAAA
Found at i:28537 original size:18 final size:18
Alignment explanation
Indices: 28516--28551 Score: 54
Period size: 18 Copynumber: 2.0 Consensus size: 18
28506 TTAATATTTA
28516 TTAAAAATAAATTAAATT
1 TTAAAAATAAATTAAATT
* *
28534 TTAATATTAAATTAAATT
1 TTAAAAATAAATTAAATT
28552 ATTTTTATAG
Statistics
Matches: 16, Mismatches: 2, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
18 16 1.00
ACGTcount: A:0.56, C:0.00, G:0.00, T:0.44
Consensus pattern (18 bp):
TTAAAAATAAATTAAATT
Found at i:31947 original size:21 final size:21
Alignment explanation
Indices: 31923--31962 Score: 53
Period size: 21 Copynumber: 1.9 Consensus size: 21
31913 ATGACCATTC
31923 TTTTCTTTGATTCTTTAATTT
1 TTTTCTTTGATTCTTTAATTT
* * *
31944 TTTTTTTTGTTTGTTTAAT
1 TTTTCTTTGATTCTTTAAT
31963 CTCAATGAAA
Statistics
Matches: 16, Mismatches: 3, Indels: 0
0.84 0.16 0.00
Matches are distributed among these distances:
21 16 1.00
ACGTcount: A:0.12, C:0.05, G:0.07, T:0.75
Consensus pattern (21 bp):
TTTTCTTTGATTCTTTAATTT
Found at i:37181 original size:21 final size:21
Alignment explanation
Indices: 37138--37181 Score: 54
Period size: 21 Copynumber: 2.1 Consensus size: 21
37128 CAAAAGATTC
**
37138 AATTGGTTAAAAAAATTTTTT
1 AATTGGTTAAAAAAATTAATT
37159 AATTGGTTTAAAAAAA-TAATT
1 AATTGG-TTAAAAAAATTAATT
37180 AA
1 AA
37182 AATTAGGCTC
Statistics
Matches: 20, Mismatches: 2, Indels: 2
0.83 0.08 0.08
Matches are distributed among these distances:
21 11 0.55
22 9 0.45
ACGTcount: A:0.50, C:0.00, G:0.09, T:0.41
Consensus pattern (21 bp):
AATTGGTTAAAAAAATTAATT
Found at i:37209 original size:17 final size:18
Alignment explanation
Indices: 37180--37214 Score: 54
Period size: 17 Copynumber: 2.0 Consensus size: 18
37170 AAAAATAATT
37180 AAAATTAGGCTCAATTAC
1 AAAATTAGGCTCAATTAC
*
37198 AAAATT-GGCTCATTTAC
1 AAAATTAGGCTCAATTAC
37215 GATTGTTATA
Statistics
Matches: 16, Mismatches: 1, Indels: 1
0.89 0.06 0.06
Matches are distributed among these distances:
17 10 0.62
18 6 0.38
ACGTcount: A:0.40, C:0.17, G:0.11, T:0.31
Consensus pattern (18 bp):
AAAATTAGGCTCAATTAC
Found at i:38033 original size:16 final size:15
Alignment explanation
Indices: 38004--38055 Score: 50
Period size: 17 Copynumber: 3.1 Consensus size: 15
37994 ACTTAAACCT
38004 AAAATTATTCAAATCTAA
1 AAAATT-TT-AAAT-TAA
38022 AAAATTTTAAATGTGAA
1 AAAATTTTAAAT-T-AA
*
38039 AAAATTTAAAATTAA
1 AAAATTTTAAATTAA
38054 AA
1 AA
38056 TATAAAAATA
Statistics
Matches: 31, Mismatches: 2, Indels: 5
0.82 0.05 0.13
Matches are distributed among these distances:
15 4 0.13
16 6 0.19
17 15 0.48
18 6 0.19
ACGTcount: A:0.60, C:0.04, G:0.04, T:0.33
Consensus pattern (15 bp):
AAAATTTTAAATTAA
Found at i:38256 original size:13 final size:12
Alignment explanation
Indices: 38238--38273 Score: 54
Period size: 13 Copynumber: 2.8 Consensus size: 12
38228 ACATAATTAT
38238 AAAATATATATAA
1 AAAATATATAT-A
38251 AAAATATGATATA
1 AAAATAT-ATATA
38264 AAAATATATA
1 AAAATATATA
38274 AATATTTTAA
Statistics
Matches: 22, Mismatches: 0, Indels: 3
0.88 0.00 0.12
Matches are distributed among these distances:
12 3 0.14
13 15 0.68
14 4 0.18
ACGTcount: A:0.67, C:0.00, G:0.03, T:0.31
Consensus pattern (12 bp):
AAAATATATATA
Found at i:38297 original size:53 final size:51
Alignment explanation
Indices: 38234--38336 Score: 120
Period size: 53 Copynumber: 2.0 Consensus size: 51
38224 CATAACATAA
38234 TTATAAAATAT-A-TATAAAAAATATGATATAAAAATATATAAATATTTTAAAAT
1 TTATAAAATATAATTATAAAAAAT-T--TATAAAAATATA-AAATATTTTAAAAT
* * *
38287 TTATATAATATAAATTATTAAAAATTTATATAAATATAAAATATTTTAAA
1 TTATAAAATAT-AATTATAAAAAATTTATAAAAATATAAAATATTTTAAA
38337 TATAATTATA
Statistics
Matches: 44, Mismatches: 3, Indels: 7
0.81 0.06 0.13
Matches are distributed among these distances:
52 12 0.27
53 21 0.48
55 2 0.05
56 9 0.20
ACGTcount: A:0.58, C:0.00, G:0.01, T:0.41
Consensus pattern (51 bp):
TTATAAAATATAATTATAAAAAATTTATAAAAATATAAAATATTTTAAAAT
Found at i:38301 original size:25 final size:25
Alignment explanation
Indices: 38269--38356 Score: 99
Period size: 25 Copynumber: 3.4 Consensus size: 25
38259 ATATAAAAAT
38269 ATATAAATATTTTAAAATTTATATA
1 ATATAAATATTTTAAAATTTATATA
*
38294 ATATAAAT-TATTAAAAATTTATATAA
1 ATATAAATAT-TTTAAAATTTATAT-A
*
38320 ATATAAAATATTTT-AAATATAATTATA
1 ATAT-AAATATTTTAAAAT-TTA-TATA
38347 ATATAAATAT
1 ATATAAATAT
38357 ATTATTAATA
Statistics
Matches: 54, Mismatches: 3, Indels: 11
0.79 0.04 0.16
Matches are distributed among these distances:
24 1 0.02
25 21 0.39
26 15 0.28
27 13 0.24
28 4 0.07
ACGTcount: A:0.56, C:0.00, G:0.00, T:0.44
Consensus pattern (25 bp):
ATATAAATATTTTAAAATTTATATA
Found at i:38322 original size:26 final size:24
Alignment explanation
Indices: 38269--38356 Score: 86
Period size: 26 Copynumber: 3.4 Consensus size: 24
38259 ATATAAAAAT
*
38269 ATATAAATATTTTAAAATTTATATA
1 ATATAAATA-TTAAAAATTTATATA
38294 ATATAAATTATTAAAAATTTATATAA
1 ATATAAA-TATTAAAAATTTATAT-A
** *
38320 ATATAAAATATTTTAAATATAATTATA
1 ATAT-AAATATTAAAAAT-TTA-TATA
38347 ATATAAATAT
1 ATATAAATAT
38357 ATTATTAATA
Statistics
Matches: 54, Mismatches: 4, Indels: 9
0.81 0.06 0.13
Matches are distributed among these distances:
25 20 0.37
26 21 0.39
27 10 0.19
28 3 0.06
ACGTcount: A:0.56, C:0.00, G:0.00, T:0.44
Consensus pattern (24 bp):
ATATAAATATTAAAAATTTATATA
Found at i:38366 original size:28 final size:27
Alignment explanation
Indices: 38289--38366 Score: 74
Period size: 26 Copynumber: 2.9 Consensus size: 27
38279 TTTAAAATTT
** *
38289 ATATAATATAAAT-TATTAAAAAT-TT
1 ATATAATATAAATATATTATTAATATA
38314 ATATAAATATAAA-ATATT-TTAAATATA
1 ATAT-AATATAAATATATTATT-AATATA
38341 ATTATAATATAAATATATTATTAATA
1 A-TATAATATAAATATATTATTAATA
38367 ACCGGGCCAC
Statistics
Matches: 43, Mismatches: 3, Indels: 11
0.75 0.05 0.19
Matches are distributed among these distances:
25 4 0.09
26 15 0.35
27 10 0.23
28 12 0.28
29 2 0.05
ACGTcount: A:0.56, C:0.00, G:0.00, T:0.44
Consensus pattern (27 bp):
ATATAATATAAATATATTATTAATATA
Found at i:38660 original size:24 final size:25
Alignment explanation
Indices: 38610--38660 Score: 68
Period size: 24 Copynumber: 2.1 Consensus size: 25
38600 TATTAATAAT
**
38610 TTAAATTATATAAATTTTTTATCTA
1 TTAAATTATATAAATTTTAAATCTA
*
38635 TTAAATTATAT-AATTTTAAATTTA
1 TTAAATTATATAAATTTTAAATCTA
38659 TT
1 TT
38661 TTTAAATTTA
Statistics
Matches: 23, Mismatches: 3, Indels: 1
0.85 0.11 0.04
Matches are distributed among these distances:
24 12 0.52
25 11 0.48
ACGTcount: A:0.41, C:0.02, G:0.00, T:0.57
Consensus pattern (25 bp):
TTAAATTATATAAATTTTAAATCTA
Found at i:38684 original size:13 final size:12
Alignment explanation
Indices: 38648--38691 Score: 61
Period size: 12 Copynumber: 3.5 Consensus size: 12
38638 AATTATATAA
38648 TTTTAAATTTAT
1 TTTTAAATTTAT
38660 TTTTAAATTTAT
1 TTTTAAATTTAT
*
38672 TTTATATATTTAT
1 TTT-TAAATTTAT
38685 ATTTTAA
1 -TTTTAA
38692 TCGTATCTAA
Statistics
Matches: 28, Mismatches: 2, Indels: 3
0.85 0.06 0.09
Matches are distributed among these distances:
12 15 0.54
13 10 0.36
14 3 0.11
ACGTcount: A:0.34, C:0.00, G:0.00, T:0.66
Consensus pattern (12 bp):
TTTTAAATTTAT
Found at i:39233 original size:11 final size:11
Alignment explanation
Indices: 39210--39244 Score: 52
Period size: 11 Copynumber: 3.1 Consensus size: 11
39200 ATAATCTCTT
39210 AAAATTATATAA
1 AAAATTAT-TAA
39222 AAAATTATTAA
1 AAAATTATTAA
*
39233 AAATTTATTAA
1 AAAATTATTAA
39244 A
1 A
39245 TATAATTTTA
Statistics
Matches: 22, Mismatches: 1, Indels: 1
0.92 0.04 0.04
Matches are distributed among these distances:
11 14 0.64
12 8 0.36
ACGTcount: A:0.63, C:0.00, G:0.00, T:0.37
Consensus pattern (11 bp):
AAAATTATTAA
Found at i:41350 original size:18 final size:18
Alignment explanation
Indices: 41327--41361 Score: 61
Period size: 18 Copynumber: 1.9 Consensus size: 18
41317 AGATTATTAT
*
41327 GGGGAAGAGGAGGAGGAG
1 GGGGAAGAGGAAGAGGAG
41345 GGGGAAGAGGAAGAGGA
1 GGGGAAGAGGAAGAGGA
41362 ATATCCTCAA
Statistics
Matches: 16, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
18 16 1.00
ACGTcount: A:0.37, C:0.00, G:0.63, T:0.00
Consensus pattern (18 bp):
GGGGAAGAGGAAGAGGAG
Found at i:46489 original size:22 final size:22
Alignment explanation
Indices: 46463--46504 Score: 57
Period size: 22 Copynumber: 1.9 Consensus size: 22
46453 AGTTAAGAAA
* * *
46463 AATAAATTTAAATTTAAATAAT
1 AATAAAATAAAATTAAAATAAT
46485 AATAAAATAAAATTAAAATA
1 AATAAAATAAAATTAAAATA
46505 TTTAGATCTA
Statistics
Matches: 17, Mismatches: 3, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
22 17 1.00
ACGTcount: A:0.67, C:0.00, G:0.00, T:0.33
Consensus pattern (22 bp):
AATAAAATAAAATTAAAATAAT
Found at i:47741 original size:20 final size:20
Alignment explanation
Indices: 47716--47754 Score: 69
Period size: 20 Copynumber: 1.9 Consensus size: 20
47706 TATATTTGAT
47716 ATATTAATATATTCATATTC
1 ATATTAATATATTCATATTC
*
47736 ATATTAATATATTTATATT
1 ATATTAATATATTCATATT
47755 TTTAGACATG
Statistics
Matches: 18, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
20 18 1.00
ACGTcount: A:0.41, C:0.05, G:0.00, T:0.54
Consensus pattern (20 bp):
ATATTAATATATTCATATTC
Found at i:53484 original size:24 final size:23
Alignment explanation
Indices: 53403--53453 Score: 63
Period size: 20 Copynumber: 2.3 Consensus size: 23
53393 TGAAAAAGTC
*
53403 ACATTTTTACCCAGATGTATTGAT
1 ACATTTTTA-CCAGATGTATCGAT
53427 ACATTTTT--CA-ATGTATCGAT
1 ACATTTTTACCAGATGTATCGAT
53447 ACATTTT
1 ACATTTT
53454 GTCTTTTACC
Statistics
Matches: 26, Mismatches: 1, Indels: 4
0.84 0.03 0.13
Matches are distributed among these distances:
20 16 0.62
21 2 0.08
24 8 0.31
ACGTcount: A:0.29, C:0.16, G:0.10, T:0.45
Consensus pattern (23 bp):
ACATTTTTACCAGATGTATCGAT
Found at i:53492 original size:20 final size:20
Alignment explanation
Indices: 53467--53521 Score: 65
Period size: 20 Copynumber: 2.8 Consensus size: 20
53457 TTTTACCTAG
* *
53467 ATGTATCGATACATTTTTTA
1 ATGTATCGATACATTTATGA
* *
53487 ATGTATCAATACATGTATGA
1 ATGTATCGATACATTTATGA
*
53507 ATGTATTGATACATT
1 ATGTATCGATACATT
53522 CTATCTTTTT
Statistics
Matches: 28, Mismatches: 7, Indels: 0
0.80 0.20 0.00
Matches are distributed among these distances:
20 28 1.00
ACGTcount: A:0.35, C:0.09, G:0.13, T:0.44
Consensus pattern (20 bp):
ATGTATCGATACATTTATGA
Found at i:58759 original size:15 final size:15
Alignment explanation
Indices: 58739--58769 Score: 53
Period size: 15 Copynumber: 2.1 Consensus size: 15
58729 TAAAAAGGTC
*
58739 CAAAATGAGGAAGCT
1 CAAAATGAAGAAGCT
58754 CAAAATGAAGAAGCT
1 CAAAATGAAGAAGCT
58769 C
1 C
58770 CAACGAAATT
Statistics
Matches: 15, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
15 15 1.00
ACGTcount: A:0.48, C:0.16, G:0.23, T:0.13
Consensus pattern (15 bp):
CAAAATGAAGAAGCT
Done.