Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold736
Parameters: 2 7 7 80 10 50 1000
Length:  33232

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6334--6462
52
2.5
52
91
2
215
29
17
17
36
1.92
6471--6495
13
1.9
13
100
0
50
36
16
16
32
1.90
6540--6590
13
3.5
13
76
23
57
35
17
13
33
1.89
6540--6609
31
2.2
32
92
2
115
34
17
12
35
1.88
6740--6780
20
2.0
20
100
0
82
34
9
36
19
1.85
12299--12346
3
16.0
3
86
0
69
29
31
0
39
1.57
12300--12348
12
4.1
12
92
7
82
26
30
0
42
1.55
13995--14082
33
2.7
33
90
0
140
46
13
12
27
1.79
15408--15615
65
3.1
66
80
9
217
21
22
13
42
1.88
15563--15656
41
2.3
40
83
3
98
21
19
14
44
1.86
15578--15827
105
2.4
106
80
5
265
22
20
14
41
1.89
15792--15895
40
2.6
41
80
4
113
26
21
16
35
1.94
15840--15946
40
2.6
41
75
11
112
26
20
14
39
1.90
16345--16458
41
2.8
41
81
2
122
20
22
14
42
1.87
16770--16848
41
1.9
41
87
5
115
20
15
10
54
1.69
18080--18105
6
4.3
6
100
0
52
30
0
0
69
0.89
23116--23193
36
2.2
35
80
10
88
35
1
5
57
1.29
23159--23284
28
4.5
28
75
12
100
36
0
1
61
1.12
23223--23305
18
4.6
17
75
12
69
30
1
1
67
1.06
23226--23314
23
4.0
22
72
15
58
31
1
1
66
1.06
23145--23305
13
13.6
12
68
17
54
36
0
1
62
1.08
23222--23312
37
2.3
41
81
16
111
31
1
1
65
1.06
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28944--29000
29
2.0
29
86
6
80
38
1
0
59
1.08
28960--28997
12
3.2
12
81
7
51
39
2
0
57
1.12
28962--29006
23
2.0
23
82
8
56
40
2
2
55
1.24
29122--29151
15
2.0
15
93
0
51
20
3
0
76
0.92
29418--29514
39
2.5
40
76
5
108
38
12
2
47
1.53
31076--31137
22
2.8
23
81
13
78
56
1
0
41
1.09
31213--31250
12
3.0
13
76
7
51
28
0
0
71
0.87
31243--31296
20
2.8
19
89
10
83
53
0
0
46
1.00
33086--33212
20
6.7
19
70
13
84
51
11
3
33
1.53
33128--33212
19
4.5
18
78
10
89
55
11
2
30
1.49
33086--33212
57
2.2
57
83
4
159
51
11
3
33
1.53

Tables:   1

The End!