Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold739
Parameters: 2 7 7 80 10 50 1000
Length:  22322

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
107--198
26
3.4
26
69
14
78
19
18
32
29
1.96
62--1631
55
27.9
54
81
10
1651
23
19
28
27
1.99
61--1631
168
9.3
167
87
6
1754
23
19
28
27
1.99
617--704
26
3.3
26
65
14
70
21
17
31
29
1.96
7850--7916
28
2.4
28
85
5
82
26
19
29
23
1.98
7877--8053
80
2.2
80
88
3
275
29
14
27
28
1.95
7985--8151
51
3.2
52
78
13
157
32
11
25
29
1.92
8200--8327
51
2.5
50
80
11
141
33
9
25
32
1.87
10339--10459
52
2.3
52
94
2
208
34
17
18
29
1.94
14219--14286
19
3.9
18
76
23
83
38
14
11
35
1.83
14241--14265
13
1.9
13
100
0
50
32
16
16
36
1.90
14222--14284
32
2.0
32
96
0
117
36
15
12
34
1.86
14573--14637
19
3.8
18
75
24
77
33
13
18
33
1.90
14574--14644
32
2.2
32
97
0
133
32
14
19
33
1.92
14593--14617
13
1.9
13
100
0
50
36
16
16
32
1.90
14689--14713
13
1.9
13
100
0
50
32
16
16
36
1.90
17772--17853
28
2.9
28
77
13
89
26
15
31
25
1.96
17836--18004
52
3.3
49
77
8
176
32
11
26
29
1.92
17989--18062
27
2.7
28
87
6
98
21
20
33
24
1.97
20540--20565
13
2.0
13
100
0
52
38
15
15
30
1.88
20519--20585
33
2.0
33
88
0
98
43
16
14
25
1.86
20605--20672
19
3.9
18
76
23
83
38
14
11
35
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20627--20651
13
1.9
13
100
0
50
32
16
16
36
1.90
20608--20670
32
2.0
32
96
0
117
36
15
12
34
1.86
20706--20783
21
3.8
21
86
8
115
32
12
16
38
1.87
20706--20787
41
2.0
40
88
6
121
32
12
17
37
1.86
22148--22184
19
1.9
19
94
0
65
51
8
10
29
1.65

Tables:   1

The End!