Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold745
Parameters: 2 7 7 80 10 50 1000
Length:  74167

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1351--1392
2
21.5
2
90
4
68
50
2
0
47
1.14
4810--4864
20
2.8
20
94
0
101
41
9
18
30
1.81
4902--4973
30
2.4
30
95
0
126
37
15
18
29
1.91
5613--5674
21
3.0
21
85
4
72
32
6
27
33
1.82
5781--5920
37
3.8
36
69
15
90
54
3
2
40
1.30
5937--5986
17
2.8
17
73
26
50
64
0
0
36
0.94
5941--5979
20
1.9
21
84
5
53
66
0
0
33
0.92
13339--13406
22
3.3
20
75
18
61
52
0
0
47
1.00
13399--13444
24
1.9
24
86
8
67
41
0
0
58
0.98
13787--13830
18
2.3
20
84
7
56
52
0
0
47
1.00
13792--13859
27
2.5
26
84
13
77
51
0
0
48
1.00
14208--14232
13
1.9
13
100
0
50
20
0
0
80
0.72
14726--14762
3
12.3
3
88
0
56
64
2
2
29
1.21
15414--15468
28
2.1
25
83
16
67
49
0
0
50
1.00
15402--15463
25
2.6
23
72
22
65
51
0
0
48
1.00
21930--22604
338
2.0
337
95
0
1215
30
17
15
36
1.91
26724--26764
18
2.3
18
86
0
55
39
4
17
39
1.71
27240--27341
16
6.0
16
68
16
55
47
9
17
25
1.78
41043--41067
2
12.5
2
100
0
50
0
48
0
52
1.00
41842--41911
20
3.5
19
78
7
68
37
1
7
54
1.37
41846--41889
19
2.2
20
84
4
54
34
2
4
59
1.30
41873--41911
21
1.9
20
84
5
51
41
0
7
51
1.31
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43306--43340
16
2.2
16
89
0
52
60
0
0
40
0.97
44418--44478
29
2.1
29
85
11
81
47
19
0
32
1.50
44418--44481
31
2.1
29
86
11
85
46
20
0
32
1.51
45999--46050
21
2.5
21
84
6
70
44
0
0
55
0.99
52313--52337
2
12.5
2
100
0
50
48
0
0
52
1.00
53777--53811
12
2.9
12
100
0
70
14
8
25
51
1.70
59302--59330
3
9.7
3
100
0
58
34
0
0
65
0.93
61062--61093
9
3.7
9
95
4
57
78
0
0
21
0.76
66953--67010
30
1.9
30
82
6
73
27
8
15
48
1.74
67462--67497
3
12.0
3
93
0
63
36
0
0
63
0.94
68155--68182
4
7.0
4
100
0
56
50
25
0
25
1.50
69568--69614
21
2.2
22
78
14
55
6
10
6
76
1.15
70426--70507
41
2.0
40
88
2
119
41
18
20
19
1.91

Tables:   1

The End!