Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold749
Parameters: 2 7 7 80 10 50 1000
Length:  46862

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2132--2166
4
8.8
4
93
0
61
25
0
20
54
1.45
4078--4126
20
2.5
20
82
0
62
10
48
4
36
1.56
7547--7736
79
2.4
79
82
6
213
33
16
27
22
1.96
7688--7759
28
2.6
27
86
8
101
26
19
31
22
1.97
7748--8084
52
6.4
51
71
14
229
31
11
25
30
1.92
7691--8086
212
1.9
212
90
5
640
31
12
26
29
1.93
7900--7975
27
2.8
28
85
2
100
21
18
34
26
1.96
10422--10486
33
2.0
33
87
0
94
43
13
15
27
1.85
10538--10686
76
2.0
76
100
0
298
30
14
17
37
1.90
10655--10753
21
4.7
22
87
6
125
34
17
12
36
1.87
10937--10982
21
2.1
22
84
4
58
30
19
30
19
1.97
12864--12933
27
2.5
28
82
13
83
25
7
22
44
1.78
13010--13058
20
2.5
20
82
0
62
10
48
4
36
1.56
13549--13577
11
2.5
12
88
11
51
37
0
0
62
0.96
14006--14063
23
2.6
23
89
8
84
34
0
3
62
1.12
14019--14076
23
2.5
24
86
8
75
44
0
1
53
1.10
14312--14351
16
2.4
17
83
4
55
50
0
2
47
1.14
15194--15218
2
12.5
2
100
0
50
48
0
0
52
1.00
16038--16067
2
15.0
2
92
0
51
50
3
0
46
1.18
21595--21670
37
2.1
37
100
0
152
26
26
10
36
1.89
28931--28997
22
3.0
22
85
10
84
68
0
1
29
0.98
28947--28993
12
4.0
12
76
13
53
72
0
2
25
0.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29604--29678
20
3.8
20
76
0
78
36
13
10
40
1.79
29604--29681
40
2.0
39
84
2
102
35
12
11
39
1.80
30558--30614
22
2.5
24
85
11
91
17
12
8
61
1.55
38116--38390
55
5.0
55
92
4
432
24
34
14
26
1.94
38116--38390
83
3.3
82
93
4
464
24
34
14
26
1.94
38116--38390
28
10.0
27
90
6
421
24
34
14
26
1.94
38389--38646
32
8.1
32
94
0
408
32
34
17
15
1.91
39182--39256
20
3.8
20
78
0
78
34
12
12
41
1.79
39182--39259
40
2.0
39
84
2
102
34
11
12
41
1.80
40136--40192
22
2.5
24
85
11
91
17
12
8
61
1.55
42584--42628
21
2.1
21
100
0
90
8
17
24
48
1.75
44439--44477
18
2.2
18
90
4
62
10
15
23
51
1.73
45243--45267
12
2.1
12
100
0
50
44
0
0
56
0.99

Tables:   1

The End!