Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold750
Parameters: 2 7 7 80 10 50 1000
Length:  55300

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9296--9322
10
2.7
10
100
0
54
77
22
0
0
0.76
13442--13591
52
2.9
51
92
4
246
30
17
19
33
1.95
13654--13678
13
1.9
13
100
0
50
32
16
16
36
1.90
13632--13698
33
2.0
33
85
0
89
40
13
11
34
1.81
18438--18469
14
2.3
14
94
0
55
37
0
0
62
0.95
22149--22263
1
115.0
1
71
0
68
84
7
3
4
0.86
22149--22263
21
5.2
21
74
15
97
84
7
3
4
0.86
23707--24156
30
15.3
29
75
9
261
30
29
16
24
1.96
23766--23818
27
2.0
27
92
0
88
33
33
16
15
1.90
23916--24156
88
2.8
87
89
3
369
33
29
16
20
1.95
23916--24156
58
4.1
58
83
5
299
33
29
16
20
1.95
24177--24428
49
5.0
49
83
7
290
25
25
15
33
1.95
24172--24425
107
2.5
99
84
7
305
24
25
15
33
1.95
24723--24789
33
2.0
33
88
0
98
34
11
13
40
1.81
24743--24767
13
1.9
13
100
0
50
36
16
16
32
1.90
24830--24854
13
1.9
13
100
0
50
32
16
16
36
1.90
29066--29092
10
2.7
10
100
0
54
0
0
22
77
0.76
38787--38898
1
112.0
1
72
0
71
84
8
3
3
0.84
38788--38898
17
6.3
17
74
11
89
84
8
3
3
0.84
38786--38895
21
5.4
20
80
11
102
83
9
3
3
0.88
40341--40790
30
15.3
29
76
9
270
30
29
16
24
1.96
40337--40790
88
5.2
88
78
8
388
29
29
16
24
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40550--40790
58
4.1
58
83
5
299
33
29
16
20
1.95
40811--41062
49
5.0
49
83
7
290
25
25
15
33
1.95
40806--41059
107
2.5
99
84
7
305
24
25
15
33
1.95
41870--41936
33
2.0
33
88
0
98
34
11
13
40
1.81
41890--41914
13
1.9
13
100
0
50
36
16
16
32
1.90
41977--42001
13
1.9
13
100
0
50
32
16
16
36
1.90
46215--46241
10
2.7
10
100
0
54
0
0
22
77
0.76

Tables:   1

The End!