Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold764
Parameters: 2 7 7 80 10 50 1000
Length:  64012

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
784--850
32
2.1
32
100
0
134
47
13
11
26
1.77
1384--1427
20
2.2
20
83
0
52
65
6
4
22
1.35
4921--4955
12
2.8
13
91
4
54
2
8
0
88
0.61
6391--6604
94
2.3
94
77
3
234
37
10
15
35
1.82
6963--7061
52
1.9
52
97
0
189
43
4
9
43
1.55
8374--8404
14
2.3
14
94
5
55
61
0
9
29
1.28
9313--9352
2
20.5
2
85
14
57
52
0
2
45
1.14
9839--10394
191
2.9
190
84
4
708
41
6
12
39
1.70
9839--10449
95
6.4
95
76
11
498
41
6
13
39
1.69
9936--10458
286
1.8
285
82
4
678
40
7
13
38
1.72
10876--10946
38
1.9
37
81
16
85
64
2
0
32
1.08
15278--15317
12
3.5
12
80
13
57
75
0
5
20
0.99
16961--17009
26
1.9
25
87
4
71
67
4
0
28
1.09
20098--20155
28
2.1
28
100
0
116
24
13
13
48
1.79
21182--21448
29
9.3
28
73
5
160
37
20
5
37
1.75
21212--21370
57
2.8
58
79
3
162
37
22
3
35
1.72
21182--21428
86
2.9
87
80
2
257
37
19
4
38
1.74
22880--22915
5
7.2
5
90
0
54
75
0
5
19
1.00
22902--22943
17
2.5
17
80
3
50
69
0
4
26
1.08
23234--23548
155
2.0
156
83
3
402
51
8
9
30
1.65
25269--25307
21
1.9
19
85
10
51
38
0
2
58
1.12
26861--26903
20
2.2
20
95
4
79
44
0
4
51
1.22
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31255--31327
27
2.7
27
89
0
110
24
5
24
45
1.74
31257--31363
51
2.0
54
82
5
130
25
5
21
47
1.72
31406--31452
13
3.6
13
85
0
58
19
42
4
34
1.70
39900--39930
2
15.5
2
100
0
62
51
0
0
48
1.00
41572--41608
2
18.5
2
100
0
74
48
0
0
51
1.00
42414--42448
13
2.7
13
87
12
54
77
2
2
17
1.02
44814--44858
3
15.0
3
100
0
90
33
0
0
66
0.92
46027--46068
20
2.1
20
86
0
57
50
9
7
33
1.62
49889--49919
2
15.5
2
100
0
62
51
0
0
48
1.00
54428--54477
24
2.1
24
82
14
59
38
2
2
58
1.21
55446--55512
32
2.1
32
100
0
134
47
13
11
26
1.77
56049--56092
20
2.2
20
83
0
52
65
6
4
22
1.35
59587--59636
12
4.2
12
78
0
55
6
14
0
80
0.90
61640--61738
52
1.9
52
97
0
189
43
4
9
43
1.55
63037--63066
13
2.3
13
94
0
51
60
0
10
30
1.30
63971--64008
2
19.5
2
84
15
53
52
0
2
44
1.14

Tables:   1

The End!