Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold778
Parameters: 2 7 7 80 10 50 1000
Length:  26836

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7499--7545
14
3.4
14
79
5
60
29
27
21
21
1.98
7487--7545
14
4.3
14
76
4
57
32
25
20
22
1.98
7488--7543
27
2.1
27
93
0
94
30
26
19
23
1.98
7734--7769
17
2.1
17
89
5
54
77
0
2
19
0.88
8082--8132
14
3.6
14
94
0
93
27
13
15
43
1.85
8889--8999
14
8.1
14
66
16
63
29
26
18
26
1.98
8899--9005
54
2.0
54
96
0
196
29
23
19
27
1.98
8879--8987
27
4.0
27
80
3
130
33
25
15
25
1.95
9270--9392
42
2.9
42
86
0
183
36
14
7
41
1.74
12051--13470
42
33.6
43
78
6
1000
16
27
15
40
1.89
12044--13470
85
16.9
85
77
7
1033
16
27
15
40
1.89
13862--13888
13
2.1
13
100
0
54
29
14
14
40
1.86
13869--13926
19
3.0
19
87
2
89
34
13
15
36
1.87
13956--14023
33
2.1
33
86
5
93
33
13
16
36
1.87
15157--15379
104
2.1
103
82
3
259
32
12
25
29
1.92
15157--15543
53
7.4
51
72
9
233
32
12
24
30
1.92
17903--17928
13
2.0
13
100
0
52
38
15
15
30
1.88
18831--19686
58
15.3
58
86
8
974
23
21
29
26
1.99
19609--19689
25
3.1
25
63
22
58
20
19
29
29
1.97
20650--20722
12
6.1
12
84
7
69
0
5
9
84
0.75
20659--20723
17
3.7
17
85
4
76
0
3
10
86
0.69
20652--20724
1
73.0
1
72
0
56
0
4
9
86
0.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20652--20724
34
2.2
33
85
7
94
0
4
9
86
0.70
20676--20724
12
4.1
12
89
10
82
0
0
10
89
0.48

Tables:   1

The End!