Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold782
Parameters: 2 7 7 80 10 50 1000
Length:  27412

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
711--763
19
2.6
21
82
11
67
58
0
0
41
0.98
1140--1170
13
2.4
13
94
0
53
45
0
0
54
0.99
1377--1431
18
3.1
18
79
12
60
58
3
0
38
1.16
1884--1931
22
2.2
22
81
3
62
41
2
6
50
1.39
2017--2082
19
3.6
17
78
13
62
43
0
0
56
0.99
2047--2106
25
2.3
26
83
13
79
50
0
0
50
1.00
2029--2077
17
2.7
18
81
9
55
44
0
0
55
0.99
2017--2113
19
5.2
19
71
20
53
45
0
0
54
0.99
2330--2354
13
1.9
13
100
0
50
48
4
0
48
1.20
3311--3369
26
2.3
26
82
5
66
57
6
5
30
1.46
3897--3945
16
3.1
15
82
8
62
61
0
0
38
0.96
3907--3945
19
2.2
19
86
13
57
64
0
0
35
0.94
4667--4707
19
2.3
19
87
8
59
70
0
0
29
0.87
4931--4970
2
20.0
2
94
0
71
52
0
0
47
1.00
9075--9146
21
3.1
25
75
11
64
48
2
1
47
1.25
13226--13284
27
2.2
27
81
6
66
30
6
1
61
1.32
14508--14609
37
2.9
35
79
13
102
48
0
0
51
1.00
14568--14606
21
1.9
20
84
5
51
48
0
0
51
1.00
15284--15314
2
15.5
2
100
0
62
51
0
0
48
1.00
16576--16649
30
2.5
30
76
10
80
47
0
0
52
1.00
16619--16663
19
2.3
20
88
11
67
51
0
0
48
1.00
20129--20178
22
2.4
20
81
15
57
58
0
0
42
0.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20129--20187
21
2.8
21
78
17
59
61
0
0
38
0.96
20147--20185
14
2.9
14
84
3
53
58
0
0
41
0.98
20541--20578
15
2.5
15
83
12
51
42
2
0
55
1.14
20563--20626
26
2.5
24
78
14
65
53
0
1
45
1.10
20581--20637
26
2.2
25
84
3
69
56
0
1
42
1.10
20818--20851
16
2.1
16
88
0
50
55
2
0
41
1.15
21326--21350
2
12.5
2
100
0
50
52
0
48
0
1.00
21627--21659
17
1.9
17
88
11
50
18
3
12
66
1.36
21982--22034
22
2.5
22
81
9
56
26
3
7
62
1.39
22322--22383
33
2.0
30
84
15
81
32
1
1
64
1.13
22725--22782
14
3.9
16
71
15
52
55
0
0
44
0.99
22756--22823
22
3.0
22
77
14
68
58
1
0
39
1.07
22725--22894
15
11.6
15
73
13
90
57
0
0
41
1.08
22804--23014
16
13.5
16
74
10
152
56
1
1
39
1.21
22803--22961
60
2.6
63
78
9
170
56
1
1
39
1.21
22973--23011
17
2.2
17
90
9
60
58
0
0
41
0.98
23536--23587
16
3.4
16
76
15
56
32
0
0
67
0.91
23527--23586
29
2.0
31
90
6
97
30
0
1
68
0.99

Tables:   1

The End!