Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold810
Parameters: 2 7 7 80 10 50 1000
Length:  31479

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
683--781
35
2.9
34
77
4
108
40
18
16
25
1.90
1560--1743
89
2.0
91
96
2
345
33
19
7
40
1.78
2361--2387
13
2.1
13
100
0
54
29
14
14
40
1.86
2371--2427
19
2.9
19
81
2
69
31
14
15
38
1.87
10585--10783
105
1.9
104
89
10
316
38
7
20
34
1.79
11310--11334
13
1.9
13
100
0
50
36
16
16
32
1.90
11289--11353
32
2.0
32
87
3
94
30
16
15
36
1.90
11384--11437
20
2.7
20
91
5
83
31
12
18
37
1.89
15062--15102
15
2.7
15
88
0
64
46
2
14
36
1.58
17177--17215
20
2.0
20
89
0
60
17
5
12
64
1.46
17291--17393
47
2.2
47
94
0
179
27
13
10
48
1.75
17290--17362
18
4.4
18
67
19
52
27
16
10
45
1.81
17622--17709
38
2.3
39
77
13
94
26
13
12
47
1.78
20904--20983
41
2.0
40
87
2
115
35
7
11
46
1.68
21288--21348
26
2.3
27
80
5
63
50
4
1
42
1.33
21695--21758
32
2.0
33
87
3
94
31
10
15
42
1.82
29648--29712
33
2.0
33
87
0
94
32
13
20
33
1.91

Tables:   1

The End!