Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold816
Parameters: 2 7 7 80 10 50 1000
Length:  56479

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
735--781
13
3.8
13
81
18
64
36
0
0
63
0.94
1534--1592
30
2.0
29
83
9
75
38
0
0
61
0.96
1561--1607
18
2.5
20
83
16
66
42
0
0
57
0.98
1540--1595
24
2.3
25
81
3
69
37
0
0
62
0.95
2078--2109
8
3.8
9
88
12
50
43
0
0
56
0.99
3008--3049
22
1.9
22
90
0
66
54
2
9
33
1.46
4824--4887
11
5.8
11
76
16
62
35
0
1
62
1.05
4833--4867
18
1.9
18
88
11
54
31
0
0
68
0.90
4809--4879
23
3.2
23
78
7
76
38
0
2
59
1.12
4877--4949
32
2.2
33
82
2
94
41
2
1
54
1.23
5331--5380
26
1.9
26
84
8
66
44
0
4
52
1.20
14955--14995
21
2.0
21
85
0
55
36
2
2
58
1.24
15477--15532
17
3.4
17
77
2
51
16
14
0
69
1.19
16356--16409
19
2.7
19
74
5
54
59
1
1
37
1.19
16885--16956
16
4.5
16
71
13
58
48
22
9
19
1.77
18792--18854
27
2.4
26
82
12
76
55
0
1
42
1.09
18792--18873
24
3.2
25
80
8
87
53
1
2
42
1.21
19795--19831
19
2.0
18
94
5
65
54
2
0
43
1.14
20252--20307
28
1.9
30
82
7
71
39
3
1
55
1.28
24688--24736
3
16.3
3
78
0
53
40
4
28
26
1.74
27317--27352
18
2.0
18
100
0
72
50
5
22
22
1.70
29190--29252
13
4.8
13
73
13
58
38
17
7
36
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29162--29252
26
3.5
26
83
4
94
35
15
10
38
1.83
31923--31986
33
2.0
33
84
3
85
34
14
12
39
1.83
33141--33220
40
2.0
40
100
0
160
35
22
5
37
1.76
33876--33926
24
2.1
24
92
0
84
50
11
11
25
1.72
34184--34246
26
2.4
27
84
7
78
44
4
0
50
1.23
34271--34302
16
1.9
16
93
6
55
65
0
0
34
0.93
37104--37128
11
2.3
11
100
0
50
36
8
8
48
1.62
39667--39707
21
1.9
22
85
14
59
63
2
0
34
1.08
44766--45079
174
1.8
174
83
2
425
44
16
15
23
1.85
44966--45411
149
3.0
149
96
0
840
47
14
16
21
1.81
46246--46300
26
2.2
25
80
9
58
69
18
1
10
1.27
47196--47250
21
2.5
22
82
8
60
50
0
0
49
1.00
47206--47246
21
2.0
21
90
9
66
43
0
0
56
0.99
53203--53259
21
2.8
20
83
2
69
63
1
0
35
1.05
54651--54695
20
2.2
20
84
7
56
37
2
17
42
1.62
55416--55447
16
2.1
15
94
5
55
37
15
0
46
1.46
55567--55640
22
3.1
24
80
16
75
55
0
0
44
0.99
56392--56435
17
2.6
16
86
10
61
47
4
0
47
1.22

Tables:   1

The End!