Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold822
Parameters: 2 7 7 80 10 50 1000
Length:  6221

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6--478
27
17.6
27
83
8
540
21
32
14
30
1.94
6--478
53
8.8
53
81
9
484
21
32
14
30
1.94
6--478
213
2.2
214
86
7
649
21
32
14
30
1.94
519--942
31
13.4
32
85
10
545
30
33
18
17
1.94
519--942
66
6.7
63
85
8
560
30
33
18
17
1.94
1346--1621
27
10.0
27
86
6
356
29
14
32
23
1.94
2089--2120
16
2.0
16
100
0
64
81
0
6
12
0.87
2132--2188
21
2.7
21
97
0
105
33
10
19
36
1.86
2244--2311
19
3.9
19
78
21
85
35
11
14
38
1.83
2265--2289
13
1.9
13
100
0
50
36
16
16
32
1.90
2246--2308
32
2.0
32
96
0
117
34
12
15
36
1.86
2350--2375
13
2.0
13
100
0
52
30
15
15
38
1.88
2331--2396
33
2.0
32
88
2
96
25
15
16
42
1.87
4846--4918
27
2.7
27
87
6
94
23
34
21
20
1.97
4901--5069
50
3.3
50
74
8
160
28
26
12
32
1.92
5052--5133
28
2.9
28
82
7
96
24
31
17
26
1.97

Tables:   1

The End!