Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold824
Parameters: 2 7 7 80 10 50 1000
Length:  28920

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2724--2854
32
4.1
32
92
0
208
27
22
9
40
1.84
2716--2843
10
12.2
10
69
12
60
26
22
8
42
1.82
3295--3358
32
1.9
33
87
9
94
29
12
25
32
1.92
3693--3747
19
2.7
21
83
11
78
40
10
18
30
1.85
3777--3824
20
2.5
20
86
3
62
31
16
10
41
1.82
4257--4315
32
1.9
30
83
13
75
59
10
10
20
1.58
5277--5349
20
3.6
20
81
3
101
35
13
19
31
1.91
5277--5371
41
2.3
42
96
1
174
40
12
17
29
1.87
5410--5435
13
2.0
13
100
0
52
38
15
15
30
1.88
5392--5453
31
2.0
32
87
9
92
38
16
16
29
1.90
11234--11259
13
2.0
13
100
0
52
30
15
15
38
1.88
11215--11277
32
2.0
32
87
6
92
28
15
15
39
1.89
11320--11392
20
3.6
20
81
3
101
31
19
13
35
1.91
11298--11392
41
2.3
42
96
1
174
29
17
12
40
1.87
12924--12979
20
2.7
21
83
5
78
32
17
10
39
1.84
13822--13952
32
4.1
32
92
0
208
40
9
22
27
1.84
13833--13960
10
12.2
10
69
12
60
42
8
22
26
1.82
17172--17230
21
2.8
21
75
10
66
16
22
0
61
1.35
19310--19375
32
2.1
32
88
0
96
39
7
24
28
1.82
20651--20687
18
2.1
18
90
5
58
37
0
8
54
1.30
25734--25791
29
2.0
28
83
9
73
41
1
1
55
1.20
26843--26886
21
2.1
21
91
0
70
2
11
6
79
1.01
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28860--28906
23
2.0
23
100
0
94
25
17
29
27
1.97

Tables:   1

The End!