Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold825
Parameters: 2 7 7 80 10 50 1000
Length:  20798

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
132--185
27
2.1
26
86
10
76
24
38
16
20
1.92
4917--4949
11
3.1
11
82
8
50
87
12
0
0
0.53
4918--4951
16
2.1
17
94
5
61
85
14
0
0
0.60
6200--6389
32
6.1
30
83
9
211
23
29
16
30
1.96
6205--6389
64
2.9
63
86
6
241
24
29
16
29
1.97
6363--6989
34
19.8
33
75
14
599
20
34
12
32
1.89
6363--6986
61
9.9
61
89
5
899
20
34
12
32
1.90
6452--6986
95
5.7
87
71
19
382
20
35
12
32
1.89
6991--7134
32
4.5
33
81
11
181
28
34
17
19
1.94
6991--7151
65
2.5
65
88
3
227
27
32
19
20
1.97
7158--7582
49
8.8
48
78
7
366
25
23
16
33
1.96
7158--7533
92
4.0
92
87
4
484
26
23
17
33
1.96
7487--7629
55
2.7
52
74
4
142
25
25
13
34
1.93
8268--8388
13
7.9
13
69
28
71
34
13
19
33
1.90
8281--8407
19
7.6
19
71
28
119
33
12
18
34
1.89
8267--8415
32
4.7
32
97
0
280
33
12
18
34
1.89
10837--10965
52
2.5
52
93
0
222
28
15
17
37
1.91
11060--11084
13
1.9
13
100
0
50
32
16
16
36
1.90
11039--11104
32
2.0
33
91
2
107
37
16
10
34
1.83
11841--12009
48
3.5
48
86
0
248
30
19
26
23
1.98
12042--12413
28
12.6
28
75
12
185
25
15
29
29
1.96
12190--12257
35
2.0
35
88
2
102
39
11
29
19
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12236--12407
29
5.9
29
86
4
222
25
16
30
27
1.97
12243--12407
86
1.9
86
90
1
260
23
17
30
29
1.97
13844--13880
5
7.8
5
88
8
51
0
0
10
89
0.49
13845--13880
9
3.9
9
92
7
63
0
0
11
88
0.50
13844--13881
10
3.9
10
86
6
60
0
0
10
89
0.49
13844--13880
19
1.9
19
94
0
65
0
0
10
89
0.49

Tables:   1

The End!