Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold828
Parameters: 2 7 7 80 10 50 1000
Length:  31051

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6450--6538
1
89.0
1
72
0
61
85
10
2
2
0.77
6457--6538
11
7.4
11
76
14
71
85
10
2
1
0.75
6450--6533
23
3.8
23
80
13
88
84
10
2
2
0.81
6449--6538
18
5.4
16
74
13
83
84
11
2
2
0.80
6450--6538
31
3.1
28
87
6
108
85
10
2
2
0.77
7752--8385
28
21.9
28
83
5
746
28
31
18
22
1.97
7752--8385
113
5.5
112
84
5
759
28
31
18
22
1.97
9599--9734
49
2.8
49
81
8
177
39
16
15
28
1.89
11583--11617
17
2.1
17
88
0
52
37
2
2
57
1.29
18486--18513
12
2.3
12
100
0
56
85
7
0
7
0.73
18566--18617
19
2.6
21
90
6
81
42
13
15
28
1.85
19028--19095
19
3.9
19
78
21
85
35
11
14
38
1.83
19049--19073
13
1.9
13
100
0
50
36
16
16
32
1.90
19030--19092
32
2.0
32
96
0
117
34
12
15
36
1.86
19114--19180
33
2.0
33
88
0
98
25
14
16
43
1.86
19134--19159
13
2.0
13
100
0
52
30
15
15
38
1.88
21612--21683
27
2.6
28
86
2
101
26
31
18
23
1.97
21504--21835
52
6.4
51
70
17
225
30
25
11
31
1.92
21821--21896
28
2.7
27
85
2
80
22
34
19
23
1.97
21501--21892
209
1.9
211
88
4
596
29
27
12
31
1.93
21561--21911
107
3.3
104
73
14
324
28
28
13
29
1.94
25346--25632
51
5.6
51
89
2
382
30
26
10
32
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25563--25788
79
2.9
78
78
4
195
27
28
14
29
1.95
27861--27893
4
8.2
4
93
0
57
27
0
0
72
0.85

Tables:   1

The End!