Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold832
Parameters: 2 7 7 80 10 50 1000
Length:  25145

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
589--653
10
6.4
10
73
15
53
66
0
1
32
1.01
572--648
23
3.1
23
73
15
57
62
0
1
36
1.04
926--972
19
2.7
18
87
12
71
51
6
0
42
1.27
926--971
18
2.6
17
83
16
67
50
6
0
43
1.28
1118--1205
43
2.1
42
82
2
104
38
3
2
55
1.29
1459--1516
16
3.5
16
78
4
62
29
0
1
68
0.99
1964--2024
32
1.9
32
86
6
88
50
3
3
42
1.34
1979--2036
16
3.7
15
82
8
62
51
1
3
43
1.28
1964--2036
32
2.3
32
83
6
87
52
2
2
42
1.30
8866--8896
10
3.0
10
90
9
53
29
3
0
67
1.06
9952--10005
17
3.0
18
81
13
58
31
0
5
62
1.18
9990--10038
20
2.4
21
83
10
57
53
0
4
42
1.20
10772--10821
26
2.0
25
84
4
64
42
2
0
56
1.11
10796--10837
20
2.1
20
86
0
57
57
0
0
42
0.99
10809--10840
11
3.1
11
86
13
50
59
0
0
40
0.97
11305--11405
14
7.4
15
69
22
55
57
0
0
42
0.98
11313--11370
28
2.0
29
87
9
84
55
0
0
44
0.99
11274--11385
23
5.0
23
68
15
74
57
0
0
41
1.05
11494--11534
22
2.0
22
85
9
59
58
0
9
31
1.31
11752--11816
9
7.1
9
74
25
57
66
1
0
32
1.01
11760--11844
17
5.0
18
76
15
92
65
0
0
34
0.93
11721--11850
28
4.6
29
77
13
112
62
1
0
35
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11766--11842
5
15.2
5
74
15
61
66
0
0
33
0.92
11762--11849
11
8.4
11
78
16
71
65
1
0
32
1.00
11735--11842
45
2.4
44
81
14
125
63
0
0
34
1.07
12789--12862
25
3.1
24
81
11
80
52
0
0
47
1.00
12909--12953
24
1.9
23
81
4
54
37
2
4
55
1.32
16048--16096
14
3.4
14
80
11
55
34
0
0
65
0.93
16048--16108
26
2.2
29
83
13
76
32
1
1
63
1.13
16309--16344
18
2.1
18
94
5
65
61
0
0
38
0.96
16529--16577
24
2.0
24
84
8
62
48
0
2
48
1.12
20873--20917
21
2.1
22
88
8
67
48
0
0
51
1.00
21675--21712
16
2.4
16
95
0
67
36
7
10
44
1.68
22884--22937
28
2.0
28
96
3
101
64
0
3
31
1.11

Tables:   1

The End!