Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold837
Parameters: 2 7 7 80 10 50 1000
Length:  55061

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
157--193
19
2.0
19
89
5
58
67
0
2
29
1.04
143--208
33
2.0
32
82
8
80
66
1
3
28
1.15
3736--3768
5
6.6
5
89
10
50
81
0
18
0
0.68
5242--5315
29
2.5
31
81
16
93
40
6
1
51
1.37
5242--5331
29
3.1
29
75
13
69
40
8
2
48
1.47
6461--6489
2
14.5
2
100
0
58
48
0
0
51
1.00
6865--6906
22
1.9
22
85
0
57
21
2
28
47
1.63
12988--13026
2
19.5
2
94
0
69
48
0
2
48
1.15
19073--19102
11
2.7
11
89
0
51
53
0
0
46
1.00
19341--19374
12
2.8
12
86
4
50
0
26
0
73
0.83
20256--20289
16
2.2
16
89
5
52
82
0
17
0
0.67
20256--20289
5
6.6
5
89
3
50
82
0
17
0
0.67
21768--21848
29
2.7
30
81
14
96
39
6
2
51
1.40
21768--21858
29
3.1
28
75
15
76
39
8
2
49
1.46
24753--24843
46
2.0
46
89
4
139
41
16
7
34
1.77
25508--25540
2
16.5
2
100
0
66
48
0
0
51
1.00
29525--29557
14
2.4
14
100
0
66
45
0
6
48
1.27
30113--30176
33
1.9
34
84
9
87
43
6
4
45
1.50
31616--31664
6
8.3
6
81
4
55
32
16
2
48
1.57
34978--35015
2
19.0
2
100
0
76
50
0
0
50
1.00
37004--37058
28
2.0
28
96
0
101
20
10
20
49
1.78
37063--37108
24
1.9
24
91
8
76
17
8
28
45
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39654--39699
21
2.1
22
84
4
58
30
19
30
19
1.97
41603--41657
28
2.0
28
96
0
101
20
10
20
49
1.78
42323--42356
16
2.2
16
89
5
52
82
0
17
0
0.67
42323--42356
5
6.6
5
89
3
50
82
0
17
0
0.67
43833--43913
29
2.7
30
81
14
96
39
6
2
51
1.40
43833--43923
29
3.1
28
75
15
76
39
8
2
49
1.46
45062--45092
2
15.5
2
100
0
62
48
0
0
51
1.00
45470--45513
23
1.9
23
85
0
61
20
2
27
50
1.60
51595--51641
2
23.5
2
91
0
76
46
0
4
48
1.21

Tables:   1

The End!