Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold840
Parameters: 2 7 7 80 10 50 1000
Length:  44085

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
916--940
11
2.3
11
100
0
50
28
0
0
72
0.86
3718--4140
151
2.8
150
86
2
560
30
14
13
41
1.84
12745--12805
16
3.8
16
77
0
50
19
13
19
47
1.82
13427--13459
17
1.9
17
93
0
57
66
0
0
33
0.92
21457--21511
20
2.6
21
88
5
76
29
18
12
40
1.87
28826--28858
6
5.5
6
100
0
66
15
18
18
48
1.81
30135--30172
2
19.0
2
100
0
76
0
50
0
50
1.00
30172--30199
2
14.0
2
100
0
56
50
0
0
50
1.00
33042--33072
2
15.5
2
93
0
53
51
3
0
45
1.17
36176--36201
13
2.0
13
100
0
52
84
0
15
0
0.62
36729--36974
124
2.0
122
88
3
359
37
17
15
29
1.90
40375--40399
2
12.5
2
100
0
50
52
0
0
48
1.00
42146--42178
2
16.5
2
100
0
66
48
0
0
51
1.00
42086--42266
92
2.0
92
92
4
303
35
4
9
50
1.55

Tables:   1

The End!