Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold844
Parameters: 2 7 7 80 10 50 1000
Length:  32174

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3319--3406
29
2.8
32
80
11
85
53
1
3
42
1.25
6056--6270
110
2.0
110
85
5
292
47
5
14
32
1.68
6360--6410
21
2.5
20
83
3
66
49
0
0
50
1.00
6448--6506
32
1.9
29
86
10
82
44
0
0
55
0.99
6464--6510
16
3.0
16
78
3
51
46
0
0
53
1.00
6477--6546
25
2.8
25
74
8
70
48
0
0
51
1.00
10474--10535
17
3.5
17
76
14
63
48
0
0
51
1.00
10934--10987
15
3.5
15
85
9
72
33
1
0
64
1.04
12119--12168
23
2.1
24
92
3
84
14
16
0
70
1.18
12307--12373
21
3.0
21
89
6
89
83
2
13
0
0.76
12318--12365
18
2.7
17
84
9
60
83
2
14
0
0.74
12777--12810
11
3.1
11
91
0
59
88
0
11
0
0.52
13350--13385
15
2.5
14
91
8
63
86
0
13
0
0.58
13590--13643
23
2.3
22
81
9
54
38
5
1
53
1.35
13898--13939
16
2.6
16
88
3
57
35
0
0
64
0.94
13910--13955
17
2.6
18
80
13
51
43
2
0
54
1.12
14267--14355
41
2.1
41
85
6
117
48
0
1
50
1.08
16124--16162
2
19.5
2
100
0
78
48
0
0
51
1.00
18671--18700
2
15.0
2
92
0
51
46
0
3
50
1.18
19939--19986
2
24.0
2
95
0
69
43
0
6
50
1.27
20084--20125
20
2.1
20
100
0
84
33
0
4
61
1.17
21321--21353
15
2.1
16
88
5
50
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21959--22003
23
2.0
22
83
12
56
35
0
0
64
0.94
22065--22115
14
3.4
14
84
13
50
43
1
0
54
1.11
21986--22101
31
3.7
31
66
21
80
43
2
1
51
1.25
23997--24068
10
7.6
10
70
22
57
41
0
0
58
0.98
24004--24063
23
2.7
22
85
14
79
40
0
0
60
0.97
23998--24072
16
4.2
16
77
22
78
41
0
0
58
0.98
24068--24122
27
2.0
27
100
0
110
36
21
10
30
1.88
24512--24695
94
2.0
93
93
1
314
32
16
22
28
1.96
24864--24918
20
2.8
19
78
15
58
45
0
3
50
1.19
24970--25004
2
17.5
2
100
0
70
51
0
0
48
1.00
27638--27677
5
8.0
5
83
10
55
0
17
2
80
0.83
27627--27669
14
3.1
13
87
12
59
2
16
2
79
0.95
27643--27685
22
2.0
22
86
9
61
0
20
2
76
0.89
30625--30651
2
13.5
2
100
0
54
48
0
0
51
1.00

Tables:   1

The End!