Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold846
Parameters: 2 7 7 80 10 50 1000
Length:  33035

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
964--1015
20
2.6
20
100
0
104
30
15
11
42
1.82
1004--1028
13
1.9
13
100
0
50
36
16
16
32
1.90
3350--3573
78
2.9
78
80
7
244
25
24
16
33
1.96
3507--3615
49
2.2
49
81
4
121
27
19
15
37
1.92
3557--3882
79
4.2
78
75
8
290
26
24
15
32
1.95
3428--3698
127
2.1
127
82
8
327
26
24
15
34
1.94
3339--3742
204
2.0
205
81
4
485
25
24
15
34
1.94
3557--3890
78
4.3
77
75
8
286
26
24
15
33
1.95
17420--17608
61
3.1
61
84
2
263
25
27
17
29
1.98
17617--17928
55
5.3
55
74
14
216
27
26
18
27
1.98
17300--17799
210
2.4
212
83
4
616
26
28
18
27
1.98
17692--17983
61
4.8
61
86
3
338
26
25
17
30
1.97
18023--18349
41
7.7
42
72
12
222
20
25
11
42
1.86
18010--18243
85
2.7
85
80
4
276
20
26
12
40
1.88
18991--19049
20
3.0
20
97
0
109
30
15
8
45
1.75
23448--23505
27
2.1
27
87
0
80
27
39
1
31
1.67
24293--24318
13
2.0
13
100
0
52
38
15
15
30
1.88
24275--24339
32
2.0
32
87
6
94
43
15
13
27
1.85
26538--26587
21
2.3
21
80
10
57
56
4
18
22
1.58
28380--28410
15
2.1
15
93
0
53
48
16
22
12
1.80
30747--30772
13
2.0
13
100
0
52
38
15
15
30
1.88
31230--31296
37
1.9
35
88
11
102
32
11
25
29
1.92

Tables:   1

The End!