Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold854
Parameters: 2 7 7 80 10 50 1000
Length:  47868

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
112--182
29
2.5
28
77
11
81
56
1
0
42
1.08
619--674
26
2.2
25
78
9
60
35
21
3
39
1.71
2055--2113
30
2.0
30
83
6
75
44
3
8
44
1.51
2359--2408
23
2.3
20
83
16
64
56
0
0
44
0.99
3348--3418
37
1.9
37
85
5
99
49
0
0
50
1.00
3860--3897
18
2.0
20
90
10
62
68
2
0
28
1.03
5039--5065
2
13.5
2
100
0
54
51
0
0
48
1.00
5894--5927
2
17.5
2
93
6
61
52
0
47
0
1.00
8606--8670
32
2.0
32
100
0
130
56
12
12
18
1.66
8731--8774
23
2.0
22
90
4
70
36
0
0
63
0.95
10587--10635
10
4.7
11
80
10
50
0
24
2
73
0.94
10957--10994
2
19.5
2
89
5
60
47
0
2
50
1.15
12286--12310
10
2.5
10
100
0
50
28
0
0
72
0.86
12278--12313
18
2.0
18
88
0
54
27
0
0
72
0.85
19578--19723
36
4.1
36
79
3
161
23
24
19
32
1.97
21462--21635
88
2.0
84
83
8
217
54
15
13
16
1.71
26662--26724
25
2.6
23
74
18
65
33
6
3
57
1.40
27374--27406
16
1.9
18
88
11
52
9
9
0
81
0.87
28972--29006
15
2.4
14
90
4
52
22
2
0
74
0.95
29599--29653
27
2.1
26
83
10
67
40
0
0
60
0.97
39448--39515
27
2.7
24
75
18
66
52
0
2
44
1.16
39455--39521
26
2.6
26
79
9
75
56
0
4
38
1.19
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40099--40138
16
2.3
18
87
8
57
45
0
0
55
0.99
41259--41308
22
2.3
23
79
6
59
52
0
0
48
1.00
42967--43004
18
2.0
18
90
10
58
47
0
2
50
1.15
42973--43021
25
2.0
25
84
8
64
55
0
2
42
1.11
43799--43855
30
1.9
30
100
0
114
45
15
15
22
1.84
43857--43926
34
2.1
34
94
2
124
45
28
5
20
1.73

Tables:   1

The End!