Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold862
Parameters: 2 7 7 80 10 50 1000
Length:  12116

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4577--4617
20
2.0
20
85
4
55
60
0
7
31
1.24
4936--5005
7
9.9
7
75
17
56
52
1
4
41
1.30
4936--5008
13
5.2
13
71
19
58
50
1
4
43
1.29
6526--6555
2
15.0
2
100
0
60
50
0
0
50
1.00
6698--6722
2
12.5
2
100
0
50
48
0
0
52
1.00
7271--7325
24
2.3
25
78
15
62
38
1
0
60
1.08
7746--7802
2
28.5
2
81
0
69
42
0
1
56
1.10
7746--7802
20
2.8
20
83
0
78
42
0
1
56
1.10
8859--8899
21
1.9
22
85
5
57
43
0
4
51
1.23
8949--8987
18
2.2
19
90
9
64
17
0
10
71
1.12
10495--10537
19
2.3
19
84
8
52
51
0
0
48
1.00
11589--11646
17
3.2
17
81
13
71
53
1
0
44
1.10
11587--11822
128
1.8
130
80
3
289
50
6
5
36
1.52

Tables:   1

The End!