Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold864
Parameters: 2 7 7 80 10 50 1000
Length:  31434

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
401--437
18
2.0
20
89
10
60
54
2
0
43
1.14
856--892
2
18.5
2
100
0
74
51
0
0
48
1.00
1062--1086
2
12.5
2
100
0
50
52
0
0
48
1.00
2693--2724
13
2.5
13
94
0
55
50
0
0
50
1.00
2965--2990
4
6.5
4
100
0
52
23
0
0
76
0.78
4841--4922
11
7.4
12
79
15
88
67
1
1
30
1.06
4846--4931
27
3.1
27
80
14
79
66
1
1
31
1.07
4859--4936
10
7.6
10
81
13
72
67
1
0
30
0.98
4893--4936
19
2.3
19
92
0
70
68
2
0
29
1.02
4851--4930
34
2.3
34
83
10
92
68
1
0
30
0.97
4862--4937
12
7.5
10
77
20
54
67
1
0
31
0.99
4833--4948
19
6.5
18
71
20
66
62
0
0
35
1.07
4885--4948
27
2.4
26
77
12
67
62
1
0
35
1.05
5678--5722
2
22.5
2
100
0
90
48
0
0
51
1.00
5694--6041
160
2.2
161
97
0
662
34
13
10
41
1.80
7064--7103
9
4.8
9
82
17
59
42
0
0
57
0.98
7236--7286
24
2.2
24
82
10
61
41
1
13
43
1.55
8144--8181
2
19.0
2
100
0
76
0
50
0
50
1.00
9075--9126
11
5.1
11
72
23
51
53
0
0
46
1.00
9680--9725
19
2.3
20
88
3
67
39
0
2
58
1.10
10087--10116
13
2.2
14
94
5
53
66
3
0
30
1.07
11240--12021
390
2.0
389
98
0
1510
42
9
11
36
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12923--12956
18
1.9
18
88
5
52
61
0
0
38
0.96
14455--14508
21
2.6
21
76
2
65
61
0
0
38
0.96
14476--14541
30
2.2
30
83
5
80
53
0
0
46
1.00
14972--15009
15
2.6
15
87
4
51
39
0
7
52
1.31
15049--15119
29
2.4
29
77
11
74
49
0
0
50
1.00
15127--15187
28
2.1
29
81
3
70
59
1
1
37
1.17
16437--16467
3
10.3
3
92
0
53
35
32
0
32
1.58
17486--17526
12
3.2
12
86
13
55
56
0
0
43
0.99
17476--17581
28
3.9
28
71
23
75
54
1
1
41
1.22
17470--17540
16
4.6
16
73
21
55
56
0
1
42
1.08
18283--18328
18
2.5
19
72
6
51
39
0
0
60
0.97
18549--18611
31
2.0
31
82
11
76
46
1
0
52
1.10
19231--19264
17
2.0
17
88
0
50
58
0
2
38
1.13
20825--20869
22
2.1
23
84
12
60
42
0
0
57
0.98
20832--20951
36
3.3
38
72
22
98
42
0
0
56
1.05
20852--20952
35
2.9
34
80
14
91
42
0
0
56
1.06
21239--21270
2
16.0
2
100
0
64
50
0
0
50
1.00
26791--26830
17
2.4
17
87
4
55
52
0
2
45
1.14
27716--27762
24
1.9
25
83
12
62
51
2
6
40
1.39
31326--31376
10
5.1
10
77
13
52
56
0
1
41
1.10
31330--31376
20
2.3
21
85
10
62
55
0
2
42
1.12

Tables:   1

The End!