Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold867
Parameters: 2 7 7 80 10 50 1000
Length:  33168

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11078--11133
22
2.5
23
97
2
105
62
8
10
17
1.52
12044--12118
20
3.8
20
80
3
80
40
12
13
34
1.81
12041--12118
40
2.0
39
87
2
111
39
12
12
34
1.82
12674--12784
28
3.9
28
90
2
159
22
19
29
27
1.98
12659--12814
56
2.7
55
87
7
204
23
17
30
28
1.97
12632--13222
32
18.8
32
89
4
721
19
18
31
29
1.96
13205--14406
27
44.0
27
92
2
1963
26
14
35
23
1.93
13205--14406
82
14.7
81
92
2
1963
26
14
35
23
1.93
13205--14406
109
11.0
108
93
1
1963
26
14
35
23
1.93
15686--15737
23
2.3
23
83
12
63
5
11
7
75
1.19
15718--15760
15
2.8
16
79
13
54
4
18
11
65
1.42
21876--21932
23
2.5
23
100
0
114
63
8
10
17
1.51
22843--22917
20
3.8
20
80
3
80
40
12
13
34
1.81
22840--22917
40
2.0
39
87
2
111
39
12
12
34
1.82
24415--24518
1
104.0
1
71
0
73
85
10
1
1
0.75
24413--24518
10
9.6
11
78
17
96
84
11
1
1
0.77
25982--26374
37
11.4
37
85
12
495
20
35
11
31
1.89
25955--26407
100
4.4
102
82
14
490
21
35
12
30
1.91
26359--26428
33
2.1
35
94
5
126
25
37
17
20
1.94
26428--26932
49
10.8
48
82
11
618
25
24
18
31
1.97
26520--26942
43
9.2
44
79
13
442
25
24
17
32
1.97
26474--26941
92
5.0
92
94
1
774
25
25
17
32
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26842--26995
52
2.9
53
82
6
195
25
24
14
35
1.93
26842--27228
169
2.2
170
81
7
408
24
26
14
34
1.94
27760--27784
13
1.9
13
100
0
50
36
16
16
32
1.90
27848--27872
13
1.9
13
100
0
50
32
16
16
36
1.90

Tables:   1

The End!