Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold869
Parameters: 2 7 7 80 10 50 1000
Length:  27776

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
254--308
20
2.8
20
78
13
53
65
1
1
30
1.13
560--599
21
1.9
21
90
10
64
57
0
0
42
0.98
596--631
19
1.9
18
88
5
54
47
2
0
50
1.15
958--1041
41
2.0
44
84
11
113
36
0
2
60
1.10
957--1051
41
2.3
41
80
12
106
35
0
2
62
1.07
1007--1065
30
2.0
30
83
9
77
40
0
0
59
0.97
1474--1514
18
2.3
18
87
8
57
63
0
4
31
1.15
1631--1667
15
2.5
15
91
4
58
40
2
0
56
1.13
1631--1672
15
3.2
13
83
10
50
40
2
0
57
1.12
2808--2841
2
17.0
2
100
0
68
50
0
0
50
1.00
3743--3818
39
1.9
39
94
5
136
42
10
10
36
1.74
5207--5237
3
10.3
3
100
0
62
0
32
0
67
0.91
7574--7635
33
1.9
32
90
3
97
22
22
16
38
1.92
13129--13161
10
3.4
10
91
4
50
24
0
0
75
0.80
16044--16141
34
2.9
34
90
0
151
24
0
33
41
1.55
16553--16605
22
2.4
22
100
0
106
18
13
32
35
1.90
20890--21056
34
5.0
34
92
2
266
22
0
36
40
1.54
20900--21000
22
4.4
25
65
30
71
20
0
37
41
1.53
20890--21056
67
2.5
68
92
1
266
22
0
36
40
1.54
23029--23066
2
19.5
2
94
5
69
47
0
52
0
1.00
23167--23202
2
18.0
2
94
0
63
47
0
2
50
1.15
26498--26533
2
18.0
2
94
0
63
47
2
0
50
1.15

Tables:   1

The End!